EY693221

Overview
NameEY693221
Unique NameEY693221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACCR (Translation initiation factor IF-3 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=infC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21
Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768
            IR+  VRL+ A  + +GI  +++A+ +A +  LDLV+V+P+A PPV R+MDY K+R+E                + +KE+++   ID+HD++ +L+ A KFL+ GDKVK  +  +GR    + I   ++ RF     E+++ E+K     R++F+
Sbjct:    7 IRAREVRLVGANGDQLGIKSRNDALDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTVESKPKMEGRSMFL 159          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STRP4 (Translation initiation factor IF-3 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=infC PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 59/186 (31.72%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  244 YSRRRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTE 798
            +S + ++ K + ++  F  D IR   VRLI  +   +GI P SEA  +A++A +DLV++ P A PPV ++MDY K+++E            +   + +KE+++   ID+ D+  +L+ ARKFL+ G+KVKV +  +GR    + I  +++  F     ++A  E +   D R +F   +Q  P T+
Sbjct:    3 FSNKTKEVKTIAKQDLFIXDEIRVREVRLIGLEGEQLGIKPLSEAQALADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSV--VTVKEVRLSPTIDKGDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKMDGRQMF---MQLAPATD 183          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BUCAP (Translation initiation factor IF-3 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=infC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738
            IR+  VRL   + + +GIV   EA++ AE+  LDLV +SP+A+PPV R+MDY K+ YE                + +KE+K   + D+ DY V+L+   +FL+DGDKVK+ +  +GR    + I I+++ R +ND+ ELA  E+
Sbjct:   19 IRAIKVRLTGVEGDQIGIVNLREALEKAEELGLDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKV--IQVKEIKFRPSTDEGDYQVKLRNLIRFLEDGDKVKITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIES 160          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACCZ (Translation initiation factor IF-3 OS=Bacillus cereus (strain ZK / E33L) GN=infC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768
            IR+  VRL+ A  + +GI  +++A+ +A +  LDLV+V+P+A PPV R+MDY K+R+E                + +KE+++   ID+HD++ +L+ A KFL+ GDKVK  +  +GR    + I   ++ RF     E+++ E+K     R++F+
Sbjct:    7 IRAREVRLVGANGDQLGIKSRNDALDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFL 159          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACC1 (Translation initiation factor IF-3 OS=Bacillus cereus (strain ATCC 10987) GN=infC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768
            IR+  VRL+ A  + +GI  +++A+ +A +  LDLV+V+P+A PPV R+MDY K+R+E                + +KE+++   ID+HD++ +L+ A KFL+ GDKVK  +  +GR    + I   ++ RF     E+++ E+K     R++F+
Sbjct:    7 IRAREVRLVGANGDQLGIKSRNDALDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFL 159          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_BACAN (Translation initiation factor IF-3 OS=Bacillus anthracis GN=infC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21
Identity = 53/155 (34.19%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFI 768
            IR+  VRL+ A  + +GI  +++A+ +A +  LDLV+V+P+A PPV R+MDY K+R+E                + +KE+++   ID+HD++ +L+ A KFL+ GDKVK  +  +GR    + I   ++ RF     E+++ E+K     R++F+
Sbjct:    7 IRAREVRLVGANGDQLGIKSRNDALDLAANLNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFL 159          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_SALTI (Translation initiation factor IF-3 OS=Salmonella typhi GN=infC PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21
Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 1
Query:  307 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEEN 738
            IR+  VRL   +   +GIV   EA++ AE+A +DLV +SP+A+PPV R+MDY K+ YE                + +KE+K     D+ DY V+L++  +FL++GDK K+ +  +GR    + I +E++ R +ND+ ELA  E+
Sbjct:   19 IRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKV--IQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKNDLQELAVVES 160          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_PHEZH (Translation initiation factor IF-3 OS=Phenylobacterium zucineum (strain HLK1) GN=infC PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21
Identity = 52/145 (35.86%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  301 DGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEE 735
            + IR   V LID      G++P S AI+ AE+A LDLV + P+ADPPV +++DY K++++                ++LKE+K+  NIDQHDY V+ ++  +F ++GDKVK+ +  +GR      + ++L+++ + D  E+A  E
Sbjct:   14 EDIRVPRVLLIDQHGEKQGVMPTSAAIEAAEEAGLDLVEIVPNADPPVCKILDYGKFKFQEQKKKNEARKKQKV--VELKEIKLRPNIDQHDYEVKARSMHRFFEEGDKVKITLRFRGRELAHPELGMKLLQKVKVDFEEVAKVE 156          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STRZT (Translation initiation factor IF-3 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=infC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21
Identity = 59/186 (31.72%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  244 YSRRRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTE 798
            +S + ++ K + ++  F  D IR   VRLI  +   +GI P SEA  +A++A +DLV++ P A PPV ++MDY K+++E            +   + +KE+++   ID+ D+  +L+ ARKFL+ G+KVKV +  +GR    + I  +++  F     ++A  E +   D R +F   +Q  P T+
Sbjct:    3 FSNKTKEVKTIAKQDLFINDEIRVREVRLIGLEGEQLGIKPLSEAQALADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSV--VTVKEVRLSPTIDKGDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKMDGRQMF---MQLAPATD 183          
BLAST of EY693221 vs. ExPASy Swiss-Prot
Match: IF3_STRZP (Translation initiation factor IF-3 OS=Streptococcus pneumoniae (strain P1031) GN=infC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.210e-21
Identity = 59/186 (31.72%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  244 YSRRRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRVMDYNKYRYEXXXXXXXXXXXSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNPQGRGNEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIF*VQKGPPTE 798
            +S + ++ K + ++  F  D IR   VRLI  +   +GI P SEA  +A++A +DLV++ P A PPV ++MDY K+++E            +   + +KE+++   ID+ D+  +L+ ARKFL+ G+KVKV +  +GR    + I  +++  F     ++A  E +   D R +F   +Q  P T+
Sbjct:    3 FSNKTKEVKTIAKQDLFINDEIRVREVRLIGLEGEQLGIKPLSEAQALADNANVDLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSV--VTVKEVRLSPTIDKGDFDTKLRNARKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKMDGRQMF---MQLAPATD 183          
The following BLAST results are available for this feature:
BLAST of EY693221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
IF3_BACCR3.236e-2134.19Translation initiation factor IF-3 OS=Bacillus cer... [more]
IF3_STRP44.227e-2131.72Translation initiation factor IF-3 OS=Streptococcu... [more]
IF3_BUCAP4.227e-2138.89Translation initiation factor IF-3 OS=Buchnera aph... [more]
IF3_BACCZ4.227e-2134.19Translation initiation factor IF-3 OS=Bacillus cer... [more]
IF3_BACC14.227e-2134.19Translation initiation factor IF-3 OS=Bacillus cer... [more]
IF3_BACAN4.227e-2134.19Translation initiation factor IF-3 OS=Bacillus ant... [more]
IF3_SALTI5.520e-2137.50Translation initiation factor IF-3 OS=Salmonella t... [more]
IF3_PHEZH5.520e-2135.86Translation initiation factor IF-3 OS=Phenylobacte... [more]
IF3_STRZT7.210e-2131.72Translation initiation factor IF-3 OS=Streptococcu... [more]
IF3_STRZP7.210e-2131.72Translation initiation factor IF-3 OS=Streptococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693221 ID=EY693221; Name=EY693221; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCCAACTCCCTTCTCCCTTGAAAACACCACTATGGCTGGT
CTCGCCAGCGCCTTTCACTTTTCTAAAACGACACCGTCGCTCTCTTCAAT
CGAGTCCAAGTTCTTCGGCCTCCATTTGTGTAACCTCAACCATTTCTTCC
TCATTTCTTTCTCGCCTTCTTCCCATCACCACAACGTTTCCATCACCGCC
AGATACGGCGNGCGGTGGCGGGCCCCGCTTCGCAGGCTCCGACTACTCCC
GCCGCCGCCAAAAGGAAAAAGATTTGGAAGAAGAGCAAGCCTTTGATATC
GATGGCATCAGGTCGAACACTGTGAGGCTTATTGATGCTCAGCAAAACAT
GGTTGGTATAGTTCCTAAGAGTGAAGCTATTCAAATGGCCGAGGATGCTG
AACTAGACCTGGTGATAGTTTCCCCAGATGCAGATCCTCCAGTTGTCAGA
GTAATGGATTACAATAAATATAGATATGAACAGCAAAAGAAGAAGAAAGG
GCAGCAGAAGAAAAGTGCAGCCAATCGGATGGATTTGAAGGAGCTTAAAA
TGGGTTATAATATTGACCAGCATGATTATTCTGTGCGTCTAAAAGCTGCA
AGGAAGTTTCTGAAAGACGGAGACAAGGTTAAGGTCATAGTGAACCCTCA
AGGGCGGGGAAATGAATTCAGAAATATTGCTATTGAGCTAATACGACGNT
TCCAGAATGATGTTGGGGAGCTTGCTAGTGAGGAGAACAAAAATTTCAGA
GATAGGAATATATTTATATTTTAGGTTCAAAAAGGCCCTCCTACAGAGGG
CTCAGAACACCGNAGAGGAAAGAAAAACAAGTGTAGAGGAAGCTCACT
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