EY693180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693180 vs. ExPASy Swiss-Prot
Match: PAP_CANAL (Poly(A) polymerase PAPalpha OS=Candida albicans GN=PAPALPHA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.109e-40 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 3 Query: 21 LRCLKFWAKRRGIYSNANGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICE 398 LRC+K WA++R +Y N GF GGV WA+LVAR+CQLYPNA+ S +V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M +++ ++ T +V+ + G+ I + Sbjct: 210 LRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSSTQKVILAELSRGSSIMQ 335 HSP 2 Score: 40.0466 bits (92), Expect = 4.109e-40 Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 1 Query: 484 QEIELGKADWSALFEHYPFFDAYENYL-QVDIVXXXXXXLLTWKGWVESRFIQLTLEVK 657 QEI GK WS LFE + FF Y+ YL V W G++ES+ QL L+++ Sbjct: 335 QEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLE 393
BLAST of EY693180 vs. ExPASy Swiss-Prot
Match: PAP_SCHPO (Poly(A) polymerase pla1 OS=Schizosaccharomyces pombe GN=pla1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.184e-39 Identity = 61/126 (48.41%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 21 LRCLKFWAKRRGIYSNANGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICE 398 LR +KFWA+RR IY+N GF GGV WA++VAR+CQLYPNA+ S++V++FFR+ QW WP P+++ PIE G L +W+P+ P D++HRMPIITPAY M +++ ++L T ++ + I + Sbjct: 210 LRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIAD 335 HSP 2 Score: 38.1206 bits (87), Expect = 1.184e-39 Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = 1 Query: 511 WSALFEHYPFFDAYENYLQVDIVXXXXXXLLTWKGWVESRFIQLTLEVK 657 WSALF+ + FF Y++YL + L W G VES+ L ++ Sbjct: 344 WSALFQKHDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
BLAST of EY693180 vs. ExPASy Swiss-Prot
Match: PAPA_CANAL (Poly(A) polymerase PAPa OS=Candida albicans GN=PAPA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 6.765e-37 Identity = 62/121 (51.24%), Postives = 87/121 (71.90%), Query Frame = 3 Query: 21 LRCLKFWAKRRGIYSNANGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCG 383 LRC+K WA++R +Y N GF GGV WA+LVAR+CQLYPNA+ +++V +FF +Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M +++ ++ T +V+ +FQ G Sbjct: 210 LRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRG 330 HSP 2 Score: 30.0314 bits (66), Expect = 6.765e-37 Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 1 Query: 487 EIELGKADWSALFEHYPFFDAYENYL-QVDIVXXXXXXLLTWKGWVESR 630 +I +GK WS L E + FF Y+ YL V L + G VES+ Sbjct: 336 DINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLKYSGMVESK 384
BLAST of EY693180 vs. ExPASy Swiss-Prot
Match: PAP_YEAST (Poly(A) polymerase OS=Saccharomyces cerevisiae GN=PAP1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.148e-36 Identity = 62/127 (48.82%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 12 RTTLRCLKFWAKRRGIYSNANGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRI 392 R LR +K WA+RR +Y+N GF GGV WA+LVAR+CQLYPNA +++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M +++ ++ T +V+ ++F G +I Sbjct: 208 RIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQI 334 HSP 2 Score: 33.113 bits (74), Expect = 1.148e-36 Identity = 22/61 (36.07%), Postives = 29/61 (47.54%), Query Frame = 1 Query: 481 TQEIELGKADWSALFEHYPFFDAYENYLQVD-IVXXXXXXLLTWKGWVES--RFIQLTLEV 654 T +I K W+ LFE FF Y+ YL++ L W G VES R + + LEV Sbjct: 335 TNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEV 395
BLAST of EY693180 vs. ExPASy Swiss-Prot
Match: PAPO2_XENLA (Poly(A) polymerase alpha-B OS=Xenopus laevis GN=papola-B PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.283e-31 Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 102 LLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICE 398 +LVAR CQLYPNAI S LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y VS+ T VM E+F+ G I + Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITD 99 HSP 2 Score: 38.1206 bits (87), Expect = 6.283e-31 Identity = 21/53 (39.62%), Postives = 28/53 (52.83%), Query Frame = 1 Query: 472 LCPTQEIELGKADWSALFEHYPFFDAYENYLQVDIVXXXXXXLLTWKGWVESR 630 L T EI L KA+WS LF+ FF Y++Y+ + L W G VES+ Sbjct: 95 LAITDEILLVKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQRLEWVGLVESK 147 The following BLAST results are available for this feature:
BLAST of EY693180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693180 ID=EY693180; Name=EY693180; organism=Citrus sinensis; type=EST; length=891bpback to top |