EY693147

Overview
NameEY693147
Unique NameEY693147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.900e-14
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = -1
Query:  344 FGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 628
            FGPV  +M F    E I+ AN T +GLVAGV+T+D  + + ++  L+ G V++N Y A    + P GG K SG+GRE G   +  +T +KT+ +K
Sbjct:  402 FGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLA-ASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMK 495          

HSP 2 Score: 27.7202 bits (60), Expect = 1.900e-14
Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = -3
Query:  621 PSRSGGYFQEAVLFRDVPPDSRXAQHEVFWP 713
            P  + GYF +  +F +V  D R A+ E+F P
Sbjct:  374 PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGP 404          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = -1
Query:  338 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIKHG 673
            F  CR  +     + FGPV++++ +  E E +R AN T FGL AGV T D  R  R+   L  G  +IN +G     E+P GG K SG GRE G   L  +T +K++ ++ G
Sbjct:  374 FTDCRDEMEIVREEIFGPVMSILSYQSEEEVVRRANDTTFGLAAGVVTNDLTRAHRVIHQLEAGICWINTWGE-SAAEMPVGGYKQSGVGRENGLMTLEHYTQIKSVQVELG 484          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  332 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIKHG*F 673
            F+ C   ++    + FGPVL+++ +  E EAIR AN T +GL AGV T D AR  R+   L  G  +IN +G     ++P GG K SG GRE G  +L  +T +K++ ++ G F
Sbjct:  374 FSDCSDDMSIVREEIFGPVLSLLEYQGEDEAIRRANDTEYGLAAGVVTPDLARAHRIIHRLEAGICWINTWGE-SPAQMPVGGYKQSGIGRENGIASLAHYTRVKSVQVELGEF 486          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = -1
Query:  338 FGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIKHG 628
            FGPV+A++ ++ E E IR AN T FGL AG+ T+D  R  R+   L  G  +IN +G     ++P GG K SG GRE G  +L  FT +K++ ++ G
Sbjct:  389 FGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGE-SDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQVELG 484          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.468e-14
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = -1
Query:  344 FGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 628
            FGPV  +M F    + I+ AN T +GL AGV+T+D  R + ++  L+ G V++N Y      + PFGG K SG GRE G   L  +T LKT+A+K
Sbjct:  402 FGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMI-LSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMK 495          

HSP 2 Score: 25.409 bits (54), Expect = 2.468e-14
Identity = 13/39 (33.33%), Postives = 21/39 (53.85%), Query Frame = -3
Query:  621 ARGXCXPSRSG--GYFQEAVLFRDVPPDSRXAQHEVFWP 731
            A+  C   R G  G+F +  +F +V  + R A+ E+F P
Sbjct:  366 AKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGP 404          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: GABD1_MYCUA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 43/92 (46.74%), Postives = 52/92 (56.52%), Query Frame = -1
Query:  353 FGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTI 628
            FGPV +V    D  EAI +AN T FGL +  WT+D A Q R    +  GQVFIN        ELPFGG+K SGYGRE     +  F  +KT+
Sbjct:  365 FGPVASVYRAADIDEAIEIANATTFGLGSNAWTQDEAEQRRFINDIEAGQVFINGMTV-SYPELPFGGIKRSGYGRELAGHGIREFCNIKTV 455          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  344 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 673
            F+ C   +     + FGPVL+++ +DDE EAI  AN T +GL AGV T D +R  RL   L  G  +IN +G      +P GG K SG GRE G   L  +T  K++ ++
Sbjct:  374 FSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTWGE-SPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVE 482          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  344 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 673
            F+ C   +     + FGPVL+++ +DDE EAI  AN T +GL AGV T D +R  RL   L  G  +IN +G      +P GG K SG GRE G   L  +T  K++ ++
Sbjct:  374 FSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTWGE-SPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVE 482          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  344 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 673
            F+ C   +     + FGPVL+++ +DDE EAI  AN T +GL AGV T D +R  RL   L  G  +IN +G      +P GG K SG GRE G   L  +T  K++ ++
Sbjct:  374 FSDCTDVMTIVREEIFGPVLSLLTYDDEDEAITRANATSYGLAAGVVTPDLSRAHRLIHRLEAGICWINTWGE-SPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQVE 482          
BLAST of EY693147 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  344 FAMCRLTVAWRNTKSFGPVLAVMPFDDEAEAIRLANGTGFGLVAGVWTRDGARQMRLARTLRCGQVFINNYGAGGGVELPFGGVKASGYGREKGFEALLGFTTLKTIAIK 673
            F+ C   +     + FGPVL+++ +DDE EA+  AN T +GL AGV T D AR  RL   L  G  ++N +G      +P GG K SG GRE G   L  +T  K++ I+
Sbjct:  374 FSDCTDVMTIVREEIFGPVLSLLTYDDEDEAVTRANATTYGLAAGVVTPDLARAHRLIHRLEAGICWVNTWGE-SPAPMPVGGYKQSGVGRENGLATLQAYTRTKSVQIE 482          
The following BLAST results are available for this feature:
BLAST of EY693147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
ALDH1_ELEED1.900e-1441.05Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
BETB_SERP51.960e-1438.39Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
BETB_PSEU51.960e-1439.47Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
BETB_PSEF51.960e-1442.27Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
AL1A1_RAT2.468e-1443.16Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
GABD1_MYCUA2.560e-1446.74Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=... [more]
BETB_XANCP2.560e-1440.00Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB2.560e-1440.00Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC82.560e-1440.00Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC52.560e-1440.00Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-D05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693147 ID=EY693147; Name=EY693147; organism=Citrus sinensis; type=EST; length=922bp
TTCAGCATTGGCCGGTTGCGGTGGGGGGTACCGGCGTTGTTGATGACGAT
ATCCAGGCCGCTGAACTGCTCCAAAGTGCCACGCAGCAGGGCGCCCATGC
TTTCATCGTTAGCCACGTTGACCTCGATGAAATGCGCATGGCCGCCGCTT
TCGGCGATTTCATTGACCACCCGCTGACCGCCGACGGCGTTCATGTCGGC
GACGATGACCTTGGCGCCCTGGCGCGCGAAAGTCTTGGCGATGCCCTCGC
CAAACCCCGAACCGGCGCCGGTGACGATCGCGACTTTATTGGCTAAACGC
ATGGTGTGTTCTCCGTTCTTGTTGTTGTGAGGAATCAACCGTGTTTGATC
GCAATGGTCTTCAAGGTGGTAAAGCCCAGCAGCGCCTCGAAGCCTTTTTC
CCGGCCATAACCGCTGGCCTTCACGCCGCCGAATGGCAATTCAACGCCGC
CACCGGCACCATAGTTATTGATGAACACTTGGCCACAACGCAGGGTGCGC
GCCAGGCGCATTTGCCGCGCGCCATCGCGGGTCCACACGCCGGCCACCAG
GCCGAACCCGGTGCCGTTGGCCAGGCGAATCGCTTCGGCTTCATCGTCGA
AGGGCATCACGGCCAGCACCGGGCCAAAAGACTTCGTGTTGCGCCANGCG
ACTGTCAGGCGGCACATCGCGAAACAGCACCGCCTCCTGGAAATACCCGC
CGCTGCGGCTCGGNNCACACGNTCCGCGTGCGGCGACGGTGATCCCGGNC
CTGTCGGCTTCACGAATAACTCGCGCACCTGGCGTAGCTGCTTCTGATGA
TCAGCGGGCCATGTCCAGGCCAGCGCCAAGGCCCGGGGCCANTTTCCTAA
ACGTTTGCTTAGGGGGCCAACAGGTTTCTTATTGCTGGGTCACCACCAAA
GGGTGCGGGGGAGAAGTTGCCC
back to top