EY693125

Overview
NameEY693125
Unique NameEY693125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCA1 (Methionyl-tRNA formyltransferase OS=Mycobacterium avium (strain 104) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.269e-28
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L ++        EV A++T+P +   R  K  PSPVA+ ALDRG P   +  P R     F++ L  L P+ C   AYG +L  + L +PP G +N+H SLLP +RGAAPVQ A+  G   TG +      ALD+GP+       +     A ELL  L   G+ELL   L  I D +   + QPA+    ++AP+
Sbjct:    5 LVFAGTPEPALPALRRLLDSPRH-----EVIAVLTRPDAASGRRGKPEPSPVAREALDRGIP---VLRPARPNSPEFVAELAQLAPDCCAVVAYGALLRDELLAVPPHGWINLHFSLLPAWRGAAPVQAAIAAGDTITGATTFRIEPALDSGPIYGVVTEAIRPTDTAGELLARLAVSGAELLSATLDGIADSTLTPRPQPAEG--VSIAPK 206          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MARAV (Methionyl-tRNA formyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.269e-28
Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQ 735
            +VF G+P  +   L TL NA       +++  + TQP     RGRK++PSPV Q ALD G P   ++ P     +     L +LQP++ I AAYG ILP   LNIP  G +NIH SLLP +RGAAP+QRA+  G  ETG+++      LD G ++ +    +        L   L   G + +++ +  +  G    + Q
Sbjct:    3 IVFAGTPDFAATALKTLLNAG------YDIVGVYTQPDRPAGRGRKLMPSPVKQVALDTGIP---VYQPVSLKPEEAQQELASLQPDVMIVAAYGLILPKAVLNIPTHGCLNIHASLLPRWRGAAPIQRAIAAGDAETGITIMQMDEGLDTGDMLLKLDTPISADDTGGSLHDRLAEMGGKAIVQAMERLAKGDLTGEVQ 193          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_XANCP (Methionyl-tRNA formyltransferase OS=Xanthomonas campestris pv. campestris GN=fmt PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 81/210 (38.57%), Postives = 109/210 (51.90%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            +VF G+P  +V  L              EV A+ TQP     RGR + PSPV   A+ RG P   +F P+       L+ LRALQP+L +  AYG ILP   L  P  G  N+H SLLP +RGAAP+QRA++ G  ETGV L      LD GPV+  +++E+ +Q    +L   L + G+++L   L  +L    R  AQP      T A
Sbjct:    3 IVFAGTPDFAVASLRAAAQRH-------EVVAVYTQPDRPAGRGRGLTPSPVKLDAIARGIP---VFQPQTLRSPEALATLRALQPDLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAPIQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRVEIGEQETGGQLHDRLAALGAQVLSDGL-GLLRAGIRPVAQPQPAEGVTYA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_XANC8 (Methionyl-tRNA formyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 81/210 (38.57%), Postives = 109/210 (51.90%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            +VF G+P  +V  L              EV A+ TQP     RGR + PSPV   A+ RG P   +F P+       L+ LRALQP+L +  AYG ILP   L  P  G  N+H SLLP +RGAAP+QRA++ G  ETGV L      LD GPV+  +++E+ +Q    +L   L + G+++L   L  +L    R  AQP      T A
Sbjct:    3 IVFAGTPDFAVASLRAAAQRH-------EVVAVYTQPDRPAGRGRGLTPSPVKLDAIARGIP---VFQPQTLRSPEALATLRALQPDLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAPIQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRVEIGEQETGGQLHDRLAALGAQVLSDGL-GLLRAGIRPVAQPQPAEGVTYA 201          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_PROM5 (Methionyl-tRNA formyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 71/191 (37.17%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-DAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSI 705
            ++F G+P+ SV  L+ L        S  E+ A++TQP  +R RG K++ SPV QYA+  G P   +FTPE   + D F+S L+    +L +  AYG ILP K L+IP   + N H SLLP +RGAAP+Q ++ +G   TGV +      LD G V+  ++++++ +     L   L    SELL++ +  I
Sbjct:    3 IIFWGTPEYSVKSLEVL------KKSDHEILAVITQPDKKRSRGNKLIASPVKQYAMKEGLP---VFTPETLKKNDHFISLLKEFSCDLFVVIAYGKILPKKILDIPKYKSWNAHASLLPRWRGAAPIQWSILEGDDFTGVGIMRMEEGLDTGDVLVEKQIKIEKEDNLQTLTKKLSDLSSELLLKAISKI 184          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCMM (Methionyl-tRNA formyltransferase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 79/212 (37.26%), Postives = 111/212 (52.36%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L ++        +V A++T+P +   R  K  PSPVA+ AL+R  P   +  P R     F++ L  L P+ C   AYG +L    L +PP G VN+H SLLP +RGAAPVQ A+  G   TG +      +LD+GPV       +     A +LL  L   G+ELL   L  I +G+   + QPAD    TLAP+
Sbjct:    3 LVFAGTPETALPALHQLIDSPRH-----DVIAVLTRPDAASGRRGKPEPSPVARAALERDIP---VLRPSRPNSAEFVAELSELAPQCCAVVAYGALLGDALLGVPPQGWVNLHFSLLPAWRGAAPVQAAIAAGDAVTGATTFQIEPSLDSGPVYGVVTETIRPTDTAGDLLGRLAVSGAELLSATLDGIAEGALTARPQPADG--VTLAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_HALOH (Methionyl-tRNA formyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.494e-28
Identity = 71/203 (34.98%), Postives = 111/203 (54.68%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPAD 744
            +VF+GSP  +V  L+ L+N          + A+VTQP  ++ RG K+ P+PV Q A   G     +   +    + F++NLR L PE  +  A+G  L  K L +P  G +N+H SLLP YRGA+P+ RA+ +G K TGV+  +     D G +I +++++++ +  A  L   L S G +LL++ L  I  G A  + Q  D
Sbjct:    3 IVFMGSPDFAVPGLEKLYNEPG-----ITIKAVVTQPDRKKGRGHKLRPTPVKQMAHKLGLK---VLQTDNINREEFITNLRDLSPEAIVVVAFGQKLGKKVLELPSYGCINLHASLLPRYRGASPIHRAIINGDKVTGVTTMYMDEGWDTGDIIYKKEVKINREDTAGTLHDKLASIGGDLLVKTLNDIEKGVAPREKQSED 197          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_PSEU5 (Methionyl-tRNA formyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.240e-27
Identity = 72/210 (34.29%), Postives = 114/210 (54.29%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            +VF G+P+ +   L  L +A  S      + A+ TQP     RG+K++PSPV Q A+    P   +  P+   + A  + L ALQ +L +  AYG ILP   L++P +G +N H SLLP +RGAAP+QRA++ G  E+GV++      LD GP++ +    + D+     L   L   G+  +++ + ++  G+   + Q  DDS AT A
Sbjct:    7 IVFAGTPEFAAQHLQALLDAGKS------IVAVYTQPDRPAGRGQKLMPSPVKQLAVQHDIP---VLQPQTLRDPAAQAELAALQADLMVVVAYGLILPQAVLDLPRLGCINSHASLLPRWRGAAPIQRAIEAGDSESGVTVMQMEAGLDTGPMLLKVNTPISDEDTGGSLHDRLALLGAHAVVKAVDALAAGTLTPEVQ--DDSLATYA 205          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCPA (Methionyl-tRNA formyltransferase OS=Mycobacterium paratuberculosis GN=fmt PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.240e-27
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L ++        E+ A++T+P +   R  K  PSPVA+ ALDRG P   +  P R     F++ L  L P+ C   AYG +L  + L +PP G +N+H SLLP +RGAAPVQ A+  G   TG S      ALD+GP+       +     A ELL  L   G+ELL   L  I D +   + QPA+    ++AP+
Sbjct:    3 LVFAGTPEPALPALRRLLDSPRH-----EMIAVLTRPDAASGRRGKPEPSPVAREALDRGIP---VLRPARPNSPEFVAELAQLAPDCCAVVAYGALLRDELLAVPPHGWINLHFSLLPAWRGAAPVQAAIAAGDIITGASTFRIEPALDSGPIYGVVTEAIRPTDTAGELLARLAVSGAELLSATLDGIADSTLTPRPQPAEG--VSIAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LACC3 (Methionyl-tRNA formyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=fmt PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.240e-27
Identity = 72/211 (34.12%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            ++FLG+P+ +V +L+ L          +++ A++TQP  +  R  ++  SPV Q A     P   +  PE+      L+   A+ P+L +TAAYG  LP+KFL    +  VN+H SLLP YRG AP+Q ++ +G  ETGV++   V+ +DAG + A+ K+ +        +   L   G +LL+  LP I+ G+A     P D  K T +P
Sbjct:    4 VIFLGTPEFAVPILEGLIAQH------YDILAVMTQPDRKVGRKLRLAASPVKQAAQKHDIP---VLQPEKLSGSPELAQAIAMAPDLIVTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAPIQYSIMNGDSETGVTIIEMVKKMDAGDMFAQAKLPLTRADDTGTVFAKLSLLGRDLLLETLPKIIAGTA--TRTPQDPDKVTFSP 203          
The following BLAST results are available for this feature:
BLAST of EY693125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FMT_MYCA17.269e-2837.26Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_MARAV7.269e-2835.50Methionyl-tRNA formyltransferase OS=Marinobacter a... [more]
FMT_XANCP9.494e-2838.57Methionyl-tRNA formyltransferase OS=Xanthomonas ca... [more]
FMT_XANC89.494e-2838.57Methionyl-tRNA formyltransferase OS=Xanthomonas ca... [more]
FMT_PROM59.494e-2837.17Methionyl-tRNA formyltransferase OS=Prochlorococcu... [more]
FMT_MYCMM9.494e-2837.26Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_HALOH9.494e-2834.98Methionyl-tRNA formyltransferase OS=Halothermothri... [more]
FMT_PSEU51.240e-2734.29Methionyl-tRNA formyltransferase OS=Pseudomonas st... [more]
FMT_MYCPA1.240e-2737.26Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_LACC31.240e-2734.12Methionyl-tRNA formyltransferase OS=Lactobacillus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-A11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693125 ID=EY693125; Name=EY693125; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGCGTTGAAGACGAAAAGACAAAAGAAATGAATTCTTCGTT
GATGATAAGACGTTTCTTCTGCTTCAAAGGCCCGGCAACATCATCAACAA
CACCTTCCGCTTTTTCTGTTTCGAGGAAAAAGCCCCTCGTCTTCTTGGGC
TCTCCTCAGGTGTCTGTCAATGTTCTTGACACTCTGTTCAACGCTTCTTC
CTCACCCGATTCCATTTTCGAGGTTGCAGCAATAGTTACTCAGCCTCCTT
CTAGAAGAGATAGAGGTAGAAAGGTGTTGCCTTCTCCAGTAGCGCAGTAT
GCTCTTGACAGAGGCTTTCCTGCTGACCTCATCTTCACGCCTGAAAGGGC
TGGTGAGGATGCTTTCTTGTCCAATTTAAGAGCTCTGCAGCCCGAACTTT
GCATTACAGCAGCTTATGGGAATATTTTACCAAGCAAATTCCTCAATATT
CCACCAATGGGTACTGTTAATATACACCCCAGTCTGCTGCCACTTTATCG
TGGTGCTGCTCCTGTTCAACGAGCATTGCAGGATGGAGCTAAAGAAACAG
GAGTATCACTGGCATTTTCCGTCCGAGCACTTGATGCTGGACCTGTCATT
GCCCGGGAGAAAATGGAAGTTGATGACCAAATTAAGGCACCAGAGTTACT
AGTATTGCTCTTTTCTGAAGGCTCTGAACTTCTTATACGTGAGCTTCCTT
CTATATTAGATGGGTCAGCTAGGGTGAAAGCACAACCTGCAGATGATTCT
AAAGCCACCTTGGCTCCAAGATAACTACTGANGAGTCATGGCTGTCCTTC
GATGAAGAAGNCTGCTGTCNTCATAATAAGGTCGGGGGCTTGCAGGGTGG
CAGAACCNAGCTAAAATGGCGGCGTGATGACAGAATGTCAGCAAGATCCG
AAACTAAGATATTACTACAGAGGTTGCCCACCATCGACCATGAGTAATGC
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