EY693125

Overview
NameEY693125
Unique NameEY693125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_SYNWW (Methionyl-tRNA formyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=fmt PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.174e-31
Identity = 82/216 (37.96%), Postives = 122/216 (56.48%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVA----QYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            +VF+G+   ++  L  L  +        E+A +V+QP  +R RGRKV P+PV     QY L+    A+ I TPE       +  ++  +PEL I  +YG I+P   L  P  G +N+H SLLP YRGAAPVQRAL DG K +G+++ F    LD G +I +E + VDD I   EL  +L   G++LL++ +  ++ G  ++     DDS+A+ A R
Sbjct:    3 IVFMGTSHFAIPSLKALIASEH------EIAGVVSQPDKQRGRGRKVTPTPVKEIAEQYKLELLQTAN-IKTPES------IKRIKQWKPELIIVVSYGQIIPLSILEYPRHGCINVHASLLPRYRGAAPVQRALMDGIKSSGITIMFMDEGLDTGDIIMQEAIAVDDNINHGELEKILADMGADLLLQVVDRLVQGE-KLPRVVQDDSQASYAAR 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_GLOVI (Methionyl-tRNA formyltransferase OS=Gloeobacter violaceus GN=fmt PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.174e-31
Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA-FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +V+ G+ + +V  L+ L  A        EV A V+QP   + RG ++ P PV   A  RG P   +F P+R  +D   L++L ALQ +  + AAYG ILP + L++P  G +N+H SLLP YRGAAPVQ A+  G  ETG++       LD GP++ +  + +D+ I   +LL  L   G+ LL+  L        R+  +P DDS ++ AP
Sbjct:    3 VVYFGTAEFAVPTLEALLAARE-----IEVVAAVSQPDRPQGRGNRLTPPPVKAIAQSRGIP---VFQPDRLRKDLEVLAHLEALQADFFVVAAYGQILPQRVLDMPGRGCINVHGSLLPKYRGAAPVQWAIYHGEPETGITTMLMEAGLDTGPMLKKIAVPIDEDITGEQLLAQLAHLGAGLLLETLREF----DRITPEPQDDSLSSYAP 202          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_CLOCE (Methionyl-tRNA formyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=fmt PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.198e-30
Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            ++F+G+P+ +V  L+ L N        + V A+VTQP   + RG+K+   PV ++AL+ G     +  P +     F+  +R L P+L ITAAYG I+    L++PP+G +N+H SLLP YRGAAP+  ++ +G K TG++  F+   LD G ++ + ++E+   + A EL   +   G+E+L   L  + +G+  +   P DD+ ++ AP
Sbjct:    3 IIFMGTPEFAVPSLEMLINEG------YNVIAVVTQPDKPKGRGKKLAAPPVKEFALEHGIK---VLQPAKIKTPEFVEQIRELGPDLLITAAYGKIISKDMLDVPPLGCINVHGSLLPAYRGAAPIHWSIINGEKVTGITTMFTDVGLDTGDMLLKRELEISSDMTAGELHDEMAILGAEVLKDTLIHLKNGT--LVRSPQDDALSSYAP 202          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_BACHD (Methionyl-tRNA formyltransferase OS=Bacillus halodurans GN=fmt PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.565e-30
Identity = 76/211 (36.02%), Postives = 115/211 (54.50%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +VF+G+P  SV VL  L          + +AA+VTQP     R R + P PV   A     P   +  PE+  ++A L  L + +P+L +TAA+G ILP+  L  P  G +N+H SLLP YRG AP+ +A+ DG KETG+++ +    LDAG ++ +  + + D      L   L   G+ LL + +P ++ G   +++ P DD  AT AP
Sbjct:    3 IVFMGTPDFSVPVLRRLIEDG------YTIAAVVTQPDRPVGRKRVLTPPPVKVEAEKHQIP---VLQPEKIRDEAELERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHASLLPKYRGGAPIHQAIIDGEKETGITIMYMAEKLDAGDILTQVTVPIADDDHVGSLHNKLSEAGAALLAKTIPPLIKG--ELQSIPQDDQLATFAP 202          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_BACA2 (Methionyl-tRNA formyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=fmt PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.565e-30
Identity = 76/211 (36.02%), Postives = 121/211 (57.35%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +VF+G+P  SV VL TL          +EV  +VTQP   + R + + P PV   A   G P   +  PE+   +  +  + +L+P+L +TAA+G ILP + L+ P  G +N+H SLLP  RG AP+  ++  G K+TGV++ + V  LDAG +I++ ++E+D+      L   L   G++LL   +P+++ G+  +K    D+SKAT AP
Sbjct:    4 IVFMGTPDFSVPVLRTLIEDG------YEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHGIP---VLQPEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGGAPIHYSILQGKKKTGVTIMYMVEKLDAGDMISKIEVEIDETDNVGTLHDKLSIAGAKLLSETVPNVISGN--IKPIKQDESKATYAP 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_THETN (Methionyl-tRNA formyltransferase OS=Thermoanaerobacter tengcongensis GN=fmt PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 77/212 (36.32%), Postives = 119/212 (56.13%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA-FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            +VF+G+P+ +V  L  LF         ++V A+VTQP  +R RG KV  SPV + AL +G     +  PE    +  FL  L+ L PE+ + AAYG ILP + L +P  G +N+H SLLP YRGAAP+  A+ +G KETG++     + LD G ++ +  + +++   A  L   L + G+E+L   L  + +G  ++  +   D +AT AP
Sbjct:    3 IVFMGTPEFAVPSLKRLFEEG------YDVLAVVTQPDKQRGRGMKVSFSPVKELALQKGVK---VLQPESVKNNPEFLQELKELNPEVIVVAAYGKILPEEILTLPEYGCINVHASLLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLLKRSIAIEEDDDAQTLHDKLANLGAEVLSETLKKLKEG--KLIPEKQKDEEATYAP 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_THET8 (Methionyl-tRNA formyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=fmt PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            + F G+P  +V VLD L           +V  +V+QP   + RG +  PSPVA+YA   G P   +  P R  E+AFL  LR   PE+ + AAYG ++P + L+IPP G +N+HPSLLP YRGAAPVQRAL  G +ETGVS+      LD GP+ A  +  +     A  L   L  +G ELL+  L  + + + R       + +A+ AP
Sbjct:    3 VAFFGTPLWAVPVLDALRKRH-------QVVLVVSQPDKPQGRGLRPAPSPVARYAEAEGLP---LLRPARLREEAFLEALRQAAPEVAVVAAYGKLIPKEALDIPPHGFLNLHPSLLPKYRGAAPVQRALLAGERETGVSIMRLDEGLDTGPLYAVWRTPILPDEDAVALGNRLRDKGVELLLEVLERLPELTPR-----PQEGEASYAP 198          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_STRCO (Methionyl-tRNA formyltransferase OS=Streptomyces coelicolor GN=fmt PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+V+V  LD L  +        EVAA+VT+P +   RGR+++ SPVA+ A + G     +  P +  +  FL  LR + P+ C   AYG +LP   L++P  G VN+H SLLP +RGAAPVQ AL  G + TG S       LD+GPV       V     + +LL  L   G+ LL   +  I DGS     QPA+    TLAP+
Sbjct:    3 LVFAGTPEVAVPALDALIASGRH-----EVAAVVTRPDAPAGRGRRLVASPVAERAEEAGIE---VLKPAKPRDPDFLERLREIAPDCCPVVAYGALLPRVALDVPARGWVNLHFSLLPAWRGAAPVQHALMAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGAGLLAATMDGIEDGSLEAVPQPAEG--VTLAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_PERMH (Methionyl-tRNA formyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=fmt PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA-GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLA 765
            +VF G+P  +V  L  L       +S  +V A+VTQP   + RG+KV P PV   A     P   +F PE+  G       L+ L+P++ +  AYG ILP + +N+P   TVN+H SLLP YRGAAP+ RA+ +G ++TGV +   V+ LDAG +    ++ + DQ     L   L  EG++LL+  L  I  G   +K  P D  +AT A
Sbjct:    3 VVFWGTPDFAVESLKALI------ESKHQVVAVVTQPDKPKGRGKKVQPPPVKVLAEKYSIP---VFQPEKVKGNKELYQKLKELEPDIFVVVAYGKILPEEIINLPKYKTVNVHASLLPEYRGAAPIHRAIMEGKEKTGVCIMEIVKELDAGDIYQCVEIPITDQDDIVSLHDKLAKEGAKLLLDTLDKIEKG--EIKKVPQDHERATYA 202          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_PEDPA (Methionyl-tRNA formyltransferase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=fmt PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.669e-30
Identity = 72/213 (33.80%), Postives = 121/213 (56.81%), Query Frame = 1
Query:  130 KPLVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            K ++F+G+P+ S  +L +L +  +     ++V  +VTQP  +  R   + PSPV + A+        ++ PE+    A L+ L AL  +L +TAA+G  LP   +N   +G VN+H SLLP YRG APV  A+ +G KETGV++ + V+ +DAG ++A  K+ + DQ     +   L   G +LL+  LP +++G+ +   Q  D+ + + +P
Sbjct:    2 KSIIFMGTPEFSAPILQSLIDEPN-----YDVIGVVTQPDRKVGRKHVLTPSPVKKVAVKNDIK---VYQPEKLSGSAELTELIALNADLIVTAAFGQFLPMSLINSVKIGAVNVHASLLPKYRGGAPVHYAIMNGDKETGVTIIYMVKKMDAGEMLATAKIPITDQDDVGTMFEKLSLLGRDLLLDTLPQLIEGNVQPVKQ--DEEQVSFSP 204          
The following BLAST results are available for this feature:
BLAST of EY693125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FMT_SYNWW9.174e-3137.96Methionyl-tRNA formyltransferase OS=Syntrophomonas... [more]
FMT_GLOVI9.174e-3137.26Methionyl-tRNA formyltransferase OS=Gloeobacter vi... [more]
FMT_CLOCE1.198e-3034.12Methionyl-tRNA formyltransferase OS=Clostridium ce... [more]
FMT_BACHD1.565e-3036.02Methionyl-tRNA formyltransferase OS=Bacillus halod... [more]
FMT_BACA21.565e-3036.02Methionyl-tRNA formyltransferase OS=Bacillus amylo... [more]
FMT_THETN2.669e-3036.32Methionyl-tRNA formyltransferase OS=Thermoanaeroba... [more]
FMT_THET82.669e-3039.81Methionyl-tRNA formyltransferase OS=Thermus thermo... [more]
FMT_STRCO2.669e-3039.62Methionyl-tRNA formyltransferase OS=Streptomyces c... [more]
FMT_PERMH2.669e-3037.91Methionyl-tRNA formyltransferase OS=Persephonella ... [more]
FMT_PEDPA2.669e-3033.80Methionyl-tRNA formyltransferase OS=Pediococcus pe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-A11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693125 ID=EY693125; Name=EY693125; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGCGTTGAAGACGAAAAGACAAAAGAAATGAATTCTTCGTT
GATGATAAGACGTTTCTTCTGCTTCAAAGGCCCGGCAACATCATCAACAA
CACCTTCCGCTTTTTCTGTTTCGAGGAAAAAGCCCCTCGTCTTCTTGGGC
TCTCCTCAGGTGTCTGTCAATGTTCTTGACACTCTGTTCAACGCTTCTTC
CTCACCCGATTCCATTTTCGAGGTTGCAGCAATAGTTACTCAGCCTCCTT
CTAGAAGAGATAGAGGTAGAAAGGTGTTGCCTTCTCCAGTAGCGCAGTAT
GCTCTTGACAGAGGCTTTCCTGCTGACCTCATCTTCACGCCTGAAAGGGC
TGGTGAGGATGCTTTCTTGTCCAATTTAAGAGCTCTGCAGCCCGAACTTT
GCATTACAGCAGCTTATGGGAATATTTTACCAAGCAAATTCCTCAATATT
CCACCAATGGGTACTGTTAATATACACCCCAGTCTGCTGCCACTTTATCG
TGGTGCTGCTCCTGTTCAACGAGCATTGCAGGATGGAGCTAAAGAAACAG
GAGTATCACTGGCATTTTCCGTCCGAGCACTTGATGCTGGACCTGTCATT
GCCCGGGAGAAAATGGAAGTTGATGACCAAATTAAGGCACCAGAGTTACT
AGTATTGCTCTTTTCTGAAGGCTCTGAACTTCTTATACGTGAGCTTCCTT
CTATATTAGATGGGTCAGCTAGGGTGAAAGCACAACCTGCAGATGATTCT
AAAGCCACCTTGGCTCCAAGATAACTACTGANGAGTCATGGCTGTCCTTC
GATGAAGAAGNCTGCTGTCNTCATAATAAGGTCGGGGGCTTGCAGGGTGG
CAGAACCNAGCTAAAATGGCGGCGTGATGACAGAATGTCAGCAAGATCCG
AAACTAAGATATTACTACAGAGGTTGCCCACCATCGACCATGAGTAATGC
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