EY693125

Overview
NameEY693125
Unique NameEY693125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length950
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_THEFY (Methionyl-tRNA formyltransferase OS=Thermobifida fusca (strain YX) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 78/190 (41.05%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSI 705
            LVF G+P+V+V  LD L  +        EV A+VT+P +   RGR+++ SPVA+ A + G     +  P RA + AFL  LR L P+ C   AYG +L  + L+IP  G VN+H SLLP +RGAAPVQ A+  G   TG +     R LDAGPV       +  +  + +LL  L   G+ELL+R +  I
Sbjct:    3 LVFAGTPEVAVPSLDALLASEH------EVVAVVTRPDAAAGRGRRLVASPVARRAAEAGIE---VLKPARADDPAFLDRLRELAPDCCPVVAYGALLRQEALDIPRYGWVNLHFSLLPAWRGAAPVQHAILHGDDITGATTFQIERELDAGPVYGTVTEPIGPRDTSGDLLERLAKSGAELLVRTIDGI 183          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCSS (Methionyl-tRNA formyltransferase OS=Mycobacterium sp. (strain MCS) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 83/214 (38.79%), Postives = 116/214 (54.21%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPV--IAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L    +SP    EV A++T+P +   R  +  PSPVA+ ALD   P   +  P +   + F++ LR L P+ C   AYG +L  + L +PP G +N+H SLLP +RGAAPVQ A+  G   TG +      ALD+GPV  +  E +  +D   A ELL  L   G+ LL   L  I DG  +   QPAD    T+AP+
Sbjct:    3 LVFAGTPEPALPSLQRLI---ASPRH--EVVAVLTRPDAAAGRRGRPTPSPVARLALDHDIP---VLRPPKPNSEEFVAELRELAPDCCAVVAYGALLSERLLAVPPHGWINLHFSLLPAWRGAAPVQAAIAAGDAVTGATTFLIEPALDSGPVYGVVTETIRAND--TAGELLTRLAESGAHLLESTLDGIADGRLQAVPQPADG--VTVAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCSK (Methionyl-tRNA formyltransferase OS=Mycobacterium sp. (strain KMS) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 83/214 (38.79%), Postives = 116/214 (54.21%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPV--IAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L    +SP    EV A++T+P +   R  +  PSPVA+ ALD   P   +  P +   + F++ LR L P+ C   AYG +L  + L +PP G +N+H SLLP +RGAAPVQ A+  G   TG +      ALD+GPV  +  E +  +D   A ELL  L   G+ LL   L  I DG  +   QPAD    T+AP+
Sbjct:    3 LVFAGTPEPALPSLQRLI---ASPRH--EVVAVLTRPDAAAGRRGRPTPSPVARLALDHDIP---VLRPPKPNSEEFVAELRELAPDCCAVVAYGALLSERLLAVPPHGWINLHFSLLPAWRGAAPVQAAIAAGDAVTGATTFLIEPALDSGPVYGVVTETIRAND--TAGELLTRLAESGAHLLESTLDGIADGRLQAVPQPADG--VTVAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCSJ (Methionyl-tRNA formyltransferase OS=Mycobacterium sp. (strain JLS) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 83/214 (38.79%), Postives = 116/214 (54.21%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPV--IAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L    +SP    EV A++T+P +   R  +  PSPVA+ ALD   P   +  P +   + F++ LR L P+ C   AYG +L  + L +PP G +N+H SLLP +RGAAPVQ A+  G   TG +      ALD+GPV  +  E +  +D   A ELL  L   G+ LL   L  I DG  +   QPAD    T+AP+
Sbjct:    3 LVFAGTPEPALPSLQRLI---ASPRH--EVVAVLTRPDAAAGRRGRPTPSPVARLALDHDIP---VLRPPKPNSEEFVAELRELAPDCCAVVAYGALLSERLLAVPPHGWINLHFSLLPAWRGAAPVQAAIAAGDAVTGATTFLIEPALDSGPVYGVVTETIRAND--TAGELLTRLAESGAHLLESTLDGIADGRLQAVPQPADG--VTVAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_MYCS2 (Methionyl-tRNA formyltransferase OS=Mycobacterium smegmatis GN=fmt PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 81/212 (38.21%), Postives = 113/212 (53.30%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            LVF G+P+ ++  L  L  +        +V A++T+P +   R  K  PSPVAQ AL+ G P   +  P+R   D F++ L  L P+ C   AYG +L  + L +P  G +N+H SLLP +RGAAPVQ A+  G   TG +      ALD+GPV       V D   A +LL  L   G+ELL R +  I DGS     QP++    T+AP+
Sbjct:    3 LVFAGTPEPALPSLRRLIESPRH-----DVVAVLTRPDAAAGRRGKPRPSPVAQLALEHGIP---LLRPDRPNSDEFVAELTELAPDCCAVVAYGALLSQRLLAVPRHGWINLHFSLLPAWRGAAPVQAAIAAGDTVTGATTFQIEPALDSGPVYGVVTETVRDTDTAGDLLERLSDSGAELLERTIDGIADGSLTAVPQPSEG--ITVAPK 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LACJO (Methionyl-tRNA formyltransferase OS=Lactobacillus johnsonii GN=fmt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.034e-29
Identity = 75/211 (35.55%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            ++FLG+P     VL  L          +E+ A+VTQP  R  R + V  S V + AL    P   ++ P +      L+ L  ++P+  ITAAYG  LP+KFL    +  VN+H SLLP YRG AP+Q ++ +G KETGV++   V+ +DAG + A++ + + D+  +  L   L   G +LL+  LP  +DG+    AQ  D+ K   +P
Sbjct:    4 VIFLGTPNFGSVVLQGLIEQG------YEIKAVVTQPDKRVGRKQVVHQSAVKETALKHNLP---VYQPAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAPIQYSVLNGDKETGVTIMEMVKKMDAGDIFAQKALPITDEDTSGTLFDKLSILGRDLLLETLPKFIDGTVTRTAQ--DEDKVVFSP 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_THEYD (Methionyl-tRNA formyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.575e-29
Identity = 73/212 (34.43%), Postives = 114/212 (53.77%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            ++F G+P+ +V  L  L +         ++  +VTQP   + RG+ +    + + AL  G P   +  PE+  +D F+  L++L PE  I  AYG ILP + L IP  G +N+H SLLP YRGAAP+Q AL +G K TGV+       LD GP++ ++++ ++D+  A  L   L   G+EL+I  +  +  G    K Q  +    T AP+
Sbjct:    5 IIFFGTPEFAVPSLKALISRGE------KILLVVTQPDKPKGRGKNLQAPEIKKVALQCGLP---LCQPEKMKDDNFIKKLKSLNPEFAIVVAYGKILPKEILEIPKHGCINLHASLLPKYRGAAPIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAETLSEKLSVVGAELIIETIDKMRKGIITPKPQTGE---ITYAPQ 204          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_SALAI (Methionyl-tRNA formyltransferase OS=Salinispora arenicola (strain CNS-205) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.575e-29
Identity = 84/212 (39.62%), Postives = 117/212 (55.19%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            ++F G+P V++  L      ++  DS  E+ A+VT+P +   RGR +  SPVA +A ++G     + TP R  E  FL  LRAL P+     AYG ++P   L IP  G VN+H SLLP +RGAAPVQ A+  G + TG S+    + LD GPV      EV     + +LL  L   G+ LL   L +I DG+AR + QP D    +LAP+
Sbjct:    3 VIFAGTPAVAIPAL------AAVADSRHELLAVVTRPDAPAGRGRGLSRSPVAAWADEQGVE---VLTPARPREPEFLDRLRALAPDCVPVVAYGALVPPVALEIPQHGWVNLHFSLLPAWRGAAPVQHAVLHGDELTGASVFQLEQGLDTGPVYGTLTDEVGPADTSGDLLERLAHSGAGLLTAVLDAIEDGTARAEPQPVDG--VSLAPK 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_LACDB (Methionyl-tRNA formyltransferase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=fmt PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.575e-29
Identity = 75/211 (35.55%), Postives = 114/211 (54.03%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAP 768
            ++FLG+PQ    VL+ L  A       + + A+VTQP  +  R +KV+ SPV + AL    P   ++ P R  +   L  L  L  +  ITAA+G  LP+KFL    +  VN+H SLLP YRG AP+Q A+++G  ETGV++   V+ +DAG + A+  + +     + E+   L   G +LL+  LP I  G   +  +P D S+   +P
Sbjct:    4 VIFLGTPQFGATVLEGLIKAG------YHILAVVTQPDKKVGRKQKVVYSPVKEVALANDLP---LYQPVRLSKSDELDELLQLDADFIITAAFGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGAPIQYAVRNGDAETGVTIMEMVKEMDAGDMYAQASLPIRPDETSGEVFEELAPLGRDLLLETLPKIASG--EIVKKPQDPSQVVFSP 203          
BLAST of EY693125 vs. ExPASy Swiss-Prot
Match: FMT_CHLCV (Methionyl-tRNA formyltransferase OS=Chlamydophila caviae GN=fmt PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.575e-29
Identity = 72/212 (33.96%), Postives = 114/212 (53.77%), Query Frame = 1
Query:  136 LVFLGSPQVSVNVLDTLFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPADDSKATLAPR 771
            +++ G+PQ +  VL+ L +   +      V  +VT+    + R  + +PSPV   AL +  P   +  PE+A +  F+  L+A + ++ I  AYG IL    LNIP  G  N+H  LLP YRGAAP+QR + DG  ++G ++      +D G +     + V   + A EL   L ++G E+LI+ L  I DG+  +   P D SKA++AP+
Sbjct:    6 VIYFGTPQFAATVLEDLLHHDVN------VIGVVTRVDKPQKRSSQPIPSPVKTLALSKNIP---LLQPEKASDPQFIEQLKAFEADVFIVVAYGAILRQVVLNIPKYGCYNLHAGLLPAYRGAAPIQRCIMDGVTQSGNTVIRMDAGMDTGDIAGVSYVPVGPDMTAGELAEALSAQGGEILIKTLQQISDGT--ISHTPQDSSKASIAPK 206          
The following BLAST results are available for this feature:
BLAST of EY693125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FMT_THEFY5.034e-2941.05Methionyl-tRNA formyltransferase OS=Thermobifida f... [more]
FMT_MYCSS5.034e-2938.79Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_MYCSK5.034e-2938.79Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_MYCSJ5.034e-2938.79Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_MYCS25.034e-2938.21Methionyl-tRNA formyltransferase OS=Mycobacterium ... [more]
FMT_LACJO5.034e-2935.55Methionyl-tRNA formyltransferase OS=Lactobacillus ... [more]
FMT_THEYD6.575e-2934.43Methionyl-tRNA formyltransferase OS=Thermodesulfov... [more]
FMT_SALAI6.575e-2939.62Methionyl-tRNA formyltransferase OS=Salinispora ar... [more]
FMT_LACDB6.575e-2935.55Methionyl-tRNA formyltransferase OS=Lactobacillus ... [more]
FMT_CHLCV6.575e-2933.96Methionyl-tRNA formyltransferase OS=Chlamydophila ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-A11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693125 ID=EY693125; Name=EY693125; organism=Citrus sinensis; type=EST; length=950bp
CCACGCGTCCGCGTTGAAGACGAAAAGACAAAAGAAATGAATTCTTCGTT
GATGATAAGACGTTTCTTCTGCTTCAAAGGCCCGGCAACATCATCAACAA
CACCTTCCGCTTTTTCTGTTTCGAGGAAAAAGCCCCTCGTCTTCTTGGGC
TCTCCTCAGGTGTCTGTCAATGTTCTTGACACTCTGTTCAACGCTTCTTC
CTCACCCGATTCCATTTTCGAGGTTGCAGCAATAGTTACTCAGCCTCCTT
CTAGAAGAGATAGAGGTAGAAAGGTGTTGCCTTCTCCAGTAGCGCAGTAT
GCTCTTGACAGAGGCTTTCCTGCTGACCTCATCTTCACGCCTGAAAGGGC
TGGTGAGGATGCTTTCTTGTCCAATTTAAGAGCTCTGCAGCCCGAACTTT
GCATTACAGCAGCTTATGGGAATATTTTACCAAGCAAATTCCTCAATATT
CCACCAATGGGTACTGTTAATATACACCCCAGTCTGCTGCCACTTTATCG
TGGTGCTGCTCCTGTTCAACGAGCATTGCAGGATGGAGCTAAAGAAACAG
GAGTATCACTGGCATTTTCCGTCCGAGCACTTGATGCTGGACCTGTCATT
GCCCGGGAGAAAATGGAAGTTGATGACCAAATTAAGGCACCAGAGTTACT
AGTATTGCTCTTTTCTGAAGGCTCTGAACTTCTTATACGTGAGCTTCCTT
CTATATTAGATGGGTCAGCTAGGGTGAAAGCACAACCTGCAGATGATTCT
AAAGCCACCTTGGCTCCAAGATAACTACTGANGAGTCATGGCTGTCCTTC
GATGAAGAAGNCTGCTGTCNTCATAATAAGGTCGGGGGCTTGCAGGGTGG
CAGAACCNAGCTAAAATGGCGGCGTGATGACAGAATGTCAGCAAGATCCG
AAACTAAGATATTACTACAGAGGTTGCCCACCATCGACCATGAGTAATGC
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