EY693122

Overview
NameEY693122
Unique NameEY693122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693122 vs. ExPASy Swiss-Prot
Match: RS7_NEUCR (40S ribosomal protein S7 OS=Neurospora crassa GN=rps-7 PE=3 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 3.741e-13
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 2 
Query:  338 LDNKFSGKDVVLIATRVIFTSPKKGSAV-----QRSPRS-TLTTVHDAMLEDVFYPTEIVGKR 508
            L+ KFS + V+++A+R I   PK+ S       Q+ PRS TLT VHDA+L D+ YP EIVGKR
Sbjct:   87 LEKKFSDRHVLIVASRRILPRPKRSSRSRNTLKQKRPRSRTLTAVHDAILTDLVYPVEIVGKR 149

HSP 2 Score: 38.1206 bits (87), Expect = 3.741e-13
Identity = 19/53 (35.85%), Postives = 31/53 (58.49%), Query Frame = 1 
Query:  502 KTARYRLDGS*IIKIFLDARDRTNSDYKLEYFCGDYGILTGKDDGADYPCTYA 660
            K  R + DGS  +K+ LD ++R + DY+L+ +   Y  LTGK+   ++P   A
Sbjct:  148 KRLRVKEDGSKTLKVILDEKERGSVDYRLDTYSAVYRRLTGKNVLFEFPLVSA 200
The following BLAST results are available for this feature:
BLAST of EY693122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
RS7_NEUCR3.741e-1350.7940S ribosomal protein S7 OS=Neurospora crassa GN=r... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-A08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693122 ID=EY693122; Name=EY693122; organism=Citrus sinensis; type=EST; length=847bp
CCACGCGTCCGAGCAGCAGCAAGCTTGTGTGATATTTCTACTCGTGCATA
CAGATCTAAAAGCTTTGCTGCGAGCTGACAAGATGTTCACGACTAAAAAC
AAAATTCAAAAAGACAAGGATGCTCGAACCTACTGAGTTTGAGGAGACAT
GCTGCCCAAGCACTGTTTGATTTGGAGAATACCCACCAGGAGCTTAAAAG
TGACTTGAAAGATCTTTACATTAATCAAGCCATTCTAATGGCATGTTTCT
GGAAACCGCAAGGTCAATTGTTGTCTATGTGCCTTACAGATTGAGGAATG
CTTATCTCGAACATTCATTCTCGCCTTGTGACACACGCTGGACAACAAAT
TCAGCGGCAAGGATGTTGTACTCATTGCCACCCGAGTGATATTCACGTCA
CCAAAGAAAGGCTCTGCTGTTCAGAGATCTCCTAGGAGCACACTCACAAC
TGTACATGATGCCATGCTTGAAGATGTATTCTACCCAACTGAGATTGTTG
GAAAACGGCCAGATACCGCCTCGATGGATCCTAAATAATCAAGATTTTCC
TGGATGCAAGGGATAGGACCAACTCTGATTACAAGCTGGAGTATTTTTGC
GGGGATTACGGAATACTTACCGGCAAAGACGATGGTGCTGATTATCCATG
TACATATGCCTGAATAGTTGTTGCAAACGATCGTATGAGTTTTGCCCTGT
TTAATGTTTTGCACTATCACTTTGATCTGGATAGGGGACTATTGAAAAGT
TAGACTTTAAATTTGGTTGACGTCATTTTGCATACGAGAAAAAAAAAAAA
AGAAAGGGAGGGCGCCCTTTTGTTTCCTTACTGGGGGAGGGGATTTC
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