EY693112

Overview
NameEY693112
Unique NameEY693112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.447e-34
Identity = 85/212 (40.09%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++ KD V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YT H   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE+K     + +SE ++ AI  L S   E+ K   I   +V
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPVAMEILEEK-YDENMSVSEGMELAIYAL-SKTTEELKPENIDMAIV 216          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++ KD V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K     + +SE ++ A+  L S   E+ K   I   ++
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK-YDENMTVSEGMELALYAL-SKTTEELKPENIDMAII 216          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++  D V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K   + + +SE ++ A+  L S   E+ K   I   +V
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMI-VSEGMELALYAL-SKTTEELKPENIDMAIV 216          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++ KD V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K     + ++E ++ A+  L S   E+ K   I   +V
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYS-EDMTVNEGMELALYAL-SKTTEELKPENIDMAIV 216          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.436e-33
Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699
            GYDR ITIFSPEGRL+QVEYA +AV+  G T++G++ KD V +   +++  KL+D +S+  +F I  ++    +G+ ADAR L+ +AR EA   R  YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K     + ++E ++ A+  L S   E+ K   I   +V
Sbjct:    9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK-YDENMTVNEGMELALYAL-SKTTEELKPENIDMAIV 216          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33
Identity = 77/216 (35.65%), Postives = 124/216 (57.41%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I  ++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E + R   + +   +   +  L    +  F AS +   +VS ++
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYR-QDMNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQD 220          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33
Identity = 78/216 (36.11%), Postives = 123/216 (56.94%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I +++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E   R   + +   +   +  L    +  F A  +   VVS E+
Sbjct:    6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYR-EDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLED 218          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.179e-33
Identity = 75/175 (42.86%), Postives = 110/175 (62.86%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 588
            GYDR IT+FSP+GRLFQVEYA +AVK  G TS+GV+ K+ + +V  K+   KL++  S+  +F I +++G   +G+ ADAR ++++AR EA   R  Y   + V+ LAK I D  Q+YTQH  +RP G   ++  ++   G RLF+ DP+G    +KAT+ G     A+   EKK
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKK 180          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 78/216 (36.11%), Postives = 122/216 (56.48%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711
            GYDR IT+FSP+GRLFQVEYA +AVK  G T++G++  D V ++  K++  +L++  S+  +F I  ++G   +G+ ADAR+LV +AR EA   R  Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E   R   + +   +   +  L    +  F A  +   VVS E+
Sbjct:    8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYR-EDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLED 220          
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33
Identity = 78/200 (39.00%), Postives = 119/200 (59.50%), Query Frame = 1
Query:   64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQE 663
            GYDR IT+FSP+GRLFQV YA +AVK  G T++GV+ KD V +  +K++  KL++ +S   +F I  ++    +G+ ADAR LV +AR EA  +R  YG  +P+ VL K I D  Q +TQ+  +RP G   ++  ++E+  P LF+ DP+G +F  KA + G     A+   E+  R   +   + ++ AI  L   L+E
Sbjct:    9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYR-DDIGKDDAIKLAILALAKTLEE 204          
The following BLAST results are available for this feature:
BLAST of EY693112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
PSMA_METVS6.447e-3440.09Proteasome subunit alpha OS=Methanococcus vannieli... [more]
PSMA_METMP1.100e-3339.62Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSMA_METM61.100e-3339.62Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSMA_METM51.100e-3339.62Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSMA_METM71.436e-3339.62Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSMA_METBF1.876e-3335.65Proteasome subunit alpha OS=Methanosarcina barkeri... [more]
PSMA_METAC1.876e-3336.11Proteasome subunit alpha OS=Methanosarcina acetivo... [more]
PSMA_METTH4.179e-3342.86Proteasome subunit alpha OS=Methanobacterium therm... [more]
PSMA_METMA5.457e-3336.11Proteasome subunit alpha OS=Methanosarcina mazei G... [more]
PSMA_THEK17.128e-3339.00Proteasome subunit alpha OS=Thermococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693112 ID=EY693112; Name=EY693112; organism=Citrus sinensis; type=EST; length=919bp
AGAAAATTGAAAGAGAGGAATCACTGTAGCGTATAATCAACAATGAGTAG
AGGAAGTGGAGGAGGATACGATCGTCATATTACAATTTTTTCGCCTGAGG
GTCGTCTCTTTCAAGTCGAGTATGCTTTCAAAGCTGTTAAGGCTGCTGGG
GTTACCTCTATTGGTGTTCGAGGAAAGGATTCAGTCTGTGTTGTGACTCA
GAAGAAGGTCCCGGACAAGCTTTTGGATCATACAAGTGTCACACATCTTT
TCCCAATCACAAAGTACCTTGGATTGCTGGCAACTGGAATGACAGCTGAT
GCAAGGACATTGGTTCAGCAGGCAAGATATGAAGCCGCTGAGTTTCGCTT
CAAATATGGATATGAAATGCCTGTGGATGTGTTAGCCAAATGGATTGCAG
ACAAATCACAAGTATATACTCAACATGCTTATATGAGACCACTTGGTGTA
GTTGCTATGGTTTTGAGTATTGACGAAGAATGTGGACCTCGCCTCTTTAA
GTGTGACCCTGCTGGCCATTTCTTTGGCCACAAGGCAACAAGTGCTGGAT
TGAAGGAGCAAGAGGCAATTAATTTCTTGGAGAAGAAATGAAGATGATCC
TGCGTTTACCTTTCAGAAACTGTGCAGACTGCAATTTCCACCCTGCAATC
AGTCCTGCAAGAAGATTTTAAGGCGAGTGAGATTGANNGTTGCGTGGTGA
GCAAGGAGAATCCAGAATCAGAGTTTTGTCCATCGAGGAGATCGATGAGC
ACTTGACTGCTANTAGTGAACGAGATTANGAGGTGGTTTCATGCCCAGTC
ACAATGCTGAAACCAAAAACAAATGCTTTTCCCCTGTATCTGAATTATAT
TTTAANGTATTCGGAATACCACAGCCATTGCCCTCAAGCAGAAAACAACG
TTGAAAACAGTTTGTGACT
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