EY693112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.447e-34 Identity = 85/212 (40.09%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YT H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE+K + +SE ++ AI L S E+ K I +V Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPVAMEILEEK-YDENMSVSEGMELAIYAL-SKTTEELKPENIDMAIV 216
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33 Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K + +SE ++ A+ L S E+ K I ++ Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK-YDENMTVSEGMELALYAL-SKTTEELKPENIDMAII 216
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33 Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ D V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K + + +SE ++ A+ L S E+ K I +V Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMI-VSEGMELALYAL-SKTTEELKPENIDMAIV 216
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.100e-33 Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K + ++E ++ A+ L S E+ K I +V Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYS-EDMTVNEGMELALYAL-SKTTEELKPENIDMAIV 216
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.436e-33 Identity = 84/212 (39.62%), Postives = 123/212 (58.02%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVV 699 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K + ++E ++ A+ L S E+ K I +V Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESK-YDENMTVNEGMELALYAL-SKTTEELKPENIDMAIV 216
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33 Identity = 77/216 (35.65%), Postives = 124/216 (57.41%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + R + + + + L + F AS + +VS ++ Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYR-QDMNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQD 220
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33 Identity = 78/216 (36.11%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I +++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E R + + + + L + F A + VVS E+ Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYR-EDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLED 218
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.179e-33 Identity = 75/175 (42.86%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 588 GYDR IT+FSP+GRLFQVEYA +AVK G TS+GV+ K+ + +V K+ KL++ S+ +F I +++G +G+ ADAR ++++AR EA R Y + V+ LAK I D Q+YTQH +RP G ++ ++ G RLF+ DP+G +KAT+ G A+ EKK Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKK 180
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33 Identity = 78/216 (36.11%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQEDFKASEIXXCVVSKEN 711 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E R + + + + L + F A + VVS E+ Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYR-EDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLED 220
BLAST of EY693112 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33 Identity = 78/200 (39.00%), Postives = 119/200 (59.50%), Query Frame = 1 Query: 64 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK*R*SCVYLSETVQTAISTLQSVLQE 663 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ R + + ++ AI L L+E Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYR-DDIGKDDAIKLAILALAKTLEE 204 The following BLAST results are available for this feature:
BLAST of EY693112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693112 ID=EY693112; Name=EY693112; organism=Citrus sinensis; type=EST; length=919bpback to top |