EY693109

Overview
NameEY693109
Unique NameEY693109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V1_CHICK (Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus GN=UBE2V1 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.188e-34
Identity = 65/136 (47.79%), Postives = 91/136 (66.91%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T++E RIY LK+ C   YPE PP VRF ++INM  VN   GVV+P+   +L  WQ  ++++ +L +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSFSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_CHICK (Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.470e-34
Identity = 65/137 (47.45%), Postives = 93/137 (67.88%), Query Frame = 3 
Query:  144 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            GS+V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PP+VRF ++INM  +N+  G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    3 GSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 139
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_MOUSE (Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2 PE=2 SV=4)

HSP 1 Score: 143.28 bits (360), Expect = 1.591e-33
Identity = 65/136 (47.79%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PPSVRF ++INM  +N+ +G+V+ +   +L  WQ  Y+++ IL +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVILQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_RAT (Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus GN=Ube2v2 PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 2.078e-33
Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PPSVRF ++INM  +N+ +G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: MMS2_YEAST (Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae GN=MMS2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.078e-33
Identity = 70/135 (51.85%), Postives = 87/135 (64.44%), Query Frame = 3 
Query:  159 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 563
            VPRNFR      +GEKG G  + SYG+ D DDI M  W GTI+GP ++ HE RIY L + C  +YP+ PP V F S+IN+ CVN  TG V+   F  L +W+R YTME +L  L+KEMA P N+KL QP EG  F
Sbjct:    4 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 137
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_PONAB (Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33
Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PPSVRF ++INM  +N+ +G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_HUMAN (Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2 PE=1 SV=4)

HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33
Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PPSVRF ++INM  +N+ +G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_BOVIN (Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2 PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33
Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PPSVRF ++INM  +N+ +G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_DANRE (Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.032e-32
Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 3 
Query:  138 SGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            +  S V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ C   YPE PP+VRF ++I+M  +N+  G+V+ +   +L  WQ  Y+++ +L +L++ M +  N KL QPPEG
Sbjct:    2 AASSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMVDARSIPILAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
[Close]
BLAST of EY693109 vs. ExPASy Swiss-Prot
Match: UB2V2_XENLA (Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis GN=ube2v2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.945e-31
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 3 
Query:  147 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 554
            + + VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY L+L C   YPE PP+VRF +++NM  +N+  G V+ +   +L  WQ  ++++ +L +L++ M +  N KL QPPEG
Sbjct:    5 AGIKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEG 140
The following BLAST results are available for this feature:
BLAST of EY693109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
UB2V1_CHICK4.188e-3447.79Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallu... [more]
UB2V2_CHICK5.470e-3447.45Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallu... [more]
UB2V2_MOUSE1.591e-3347.79Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus m... [more]
UB2V2_RAT2.078e-3347.06Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattu... [more]
MMS2_YEAST2.078e-3351.85Ubiquitin-conjugating enzyme variant MMS2 OS=Sacch... [more]
UB2V2_PONAB2.715e-3347.06Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo... [more]
UB2V2_HUMAN2.715e-3347.06Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo ... [more]
UB2V2_BOVIN2.715e-3347.06Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos t... [more]
UB2V2_DANRE1.032e-3245.32Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio... [more]
UB2V2_XENLA1.945e-3144.12Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693109 ID=EY693109; Name=EY693109; organism=Citrus sinensis; type=EST; length=824bp
CCACGCGTCCGCTCGTCTTTGCTTGCCTTCATCTTTTCCTCAAAGATTCT
CTTCTCTTCCTCCGACCCCTCTCCCCCTTTCTTTCTCTCTTAGATCTCAG
CTTACCCATCATCAAAATCGCAACCATGACGCTAGGCTCAGGAGGATCCA
GTGTCGTGGTCCCTCGGAACTTCAGATTGTTGGAGGAACTTGAACGCGGA
GAAAAGGGTATTGGAGATGGCACTGTCAGCTATGGAATGGATGATGGAGA
TGACATTTACATGCGCTCTTGGACTGGCACCATTATCGGTCCTCACAATA
CTGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGTGATAAAGAT
TATCCAGAGAAGCCACCAAGTGTTCGTTTTCATTCACGAATCAACATGAC
TTGTGTTAACCATGAAACTGGAGTGGTGGAACCTAAAAAGTTTGGACTTC
TTGTGAATTGGCAGCGAGAGTACACCATGGAGGATATACTCACACAACTG
AAAAAGGAGATGGCAGCCCCACACAATCGGAAGCTGGTTCAACCTCCTGA
GGGTACCTACTTCTAGCTTCTAAGATCATATAGGTATCATGGGGCTTATT
GCATATTACAATATGCAATATATAGATTGTATTCCTGTGNTCATCCTGTT
GATGTAANGAACATAGAAGGAAATGCCTTGAAAGGCCTTTTTCCAATACA
TCTCCATGGCTTCATCATCGNNTTGGCTCTTTCTTTTTCTTTTTTCAAAC
TGTAATGGAAAGGATGCTGTTGATTAATGGGATTTTCTGTGTGTCAATAT
TTAAAAATAAAAAAAAAAAAAAAA
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