EY693107

Overview
NameEY693107
Unique NameEY693107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: ERF1_LOXST (Eukaryotic peptide chain release factor subunit 1 OS=Loxodes striatus GN=eRF1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.364e-56
Identity = 106/193 (54.92%), Postives = 144/193 (74.61%), Query Frame = 1
Query:  181 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEKR 756
            E +  I+ WKI++LI+ LE A+GNGTS+ISLI+PP++QIS + + L D  G A NIKS+  +++V  AI S +Q+L +  ++PPNGL+LY G  + ED K EK++    EP + IN + +LC+N F+T+ L ++L+  DKFGFI+MDGNG+LFGTL GN RE+L    VDLP KHGRGGQSALRFARLR+EKR
Sbjct:    4 EQEDAIKGWKIRRLIEYLEKAKGNGTSLISLIIPPKEQISLINQKLTDAHGRAQNIKSKAVQKAVQDAIISTKQKLSVIKQIPPNGLILYCGKFIGEDEKTEKQILEVLEPLRAINTTFFLCENTFYTQPLRDMLQEQDKFGFIIMDGNGSLFGTLQGNAREILHKFDVDLPKKHGRGGQSALRFARLRLEKR 196          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_THEVO (Peptide chain release factor subunit 1 OS=Thermoplasma volcanium GN=prf1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36
Identity = 79/185 (42.70%), Postives = 110/185 (59.46%), Query Frame = 1
Query:  187 DKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARL 741
            D+ I  ++ K+ ++ L    G GT +ISL +PP  QIS V   L DE+ T+SNIKS+  R++VLAAI S   RLK Y   PPNGLV + G + T   + +  T   EP +PI   +Y CD++FHTE L  +L+  + +G IV+D      G L+G   EV+  V   +P KH +GGQS+ RF RL
Sbjct:    7 DEQIRRYEFKRALEELSKLHGRGTELISLYIPPEKQISDVVAYLRDEYSTSSNIKSKSTRKNVLAAIESIMSRLKYYRFPPPNGLVFFVGHIATRGDQTEMYTKIIEPPEPITTFMYKCDSEFHTEMLKAMLDEKEIYGLIVIDRKEATVGFLNGTRIEVVENVQSQVPSKHHQGGQSSRRFERL 191          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_THEAC (Peptide chain release factor subunit 1 OS=Thermoplasma acidophilum GN=prf1 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.251e-35
Identity = 79/187 (42.25%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  181 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARL 741
            E D+ I  ++ K+ ++ L    G GT +ISL +PP  QIS V   L DE+ T+SNIKS+  R++VLAAI S   RLK Y   PPNG V + G + T   + +  T   EP +PI   +Y CD++FH E L  +LE  + +G IV+D      G L+G   EV+  V   +P KH +GGQS+ RF RL
Sbjct:    5 EDDEQIRRYEFKRALEELSKLHGRGTELISLYIPPDKQISDVVAYLRDEYSTSSNIKSKSTRKNVLAAIESIMARLKYYKTPPPNGFVFFEGHIATRGDQTEMYTKIIEPPEPITTFMYKCDSEFHLEMLKTMLEEKEIYGLIVIDRKEATVGFLNGTRIEVVDNVQSQVPSKHHQGGQSSRRFERL 191          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_METKA (Peptide chain release factor subunit 1 OS=Methanopyrus kandleri GN=prf1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.008e-34
Identity = 77/183 (42.08%), Postives = 114/183 (62.30%), Query Frame = 1
Query:  196 IEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDG-KEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARL 741
            +E ++ +K+I+ LE+ RG GT +I++ +PP +++S V   + +E+  ASNIKS+  R++V +AI    QRLK+  + P NGLV+  GTV  +DG KEK V    EP +P++  +Y CD+KF+ E L E LE  D +G +VMD      G + G   E +  +T D+P KH  GGQS  RF RL
Sbjct:    7 VERYRFRKMIERLENLRGQGTELITIYIPPENRLSDVIAQMREEYSQASNIKSKRTRKNVQSAIEVVMQRLKMVGETPENGLVVLVGTV--QDGTKEKMVAELIEPPEPVDRFIYRCDSKFYLEPLKEYLEEKDVYGILVMDRREATIGLVKGKRIEPVKRLTSDVPGKHKAGGQSQRRFDRL 187          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_PYRKO (Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis GN=prf1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.043e-33
Identity = 74/188 (39.36%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  190 KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            K+ E++++KK ++ L+S RG  T ++SL +P    I++V + L +E+GTA NIKS+  R++VL A+  A Q LKLY + P NGL L+ G V  ++G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EV+  +T ++P K   GGQSA R+ R+R ++
Sbjct:    4 KSAEMYELKKKVEELKSYRGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKSTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDELTSNVPGKTRAGGQSARRYERIREQE 191          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_THEON (Peptide chain release factor subunit 1 OS=Thermococcus onnurineus (strain NA1) GN=prf1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.191e-33
Identity = 74/188 (39.36%), Postives = 111/188 (59.04%), Query Frame = 1
Query:  190 KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            K+ E++++KK ++ L+S RG  T ++SL +P    I++V + L +E+GTA NIKS+  R++VL A+  A Q LKLY K P NGL L+ G V  ++G          P +P+   LY CD  F TE L E+L   D +G I ++ N    G L G   EV+  +T ++P K   GGQSA R+ R+R ++
Sbjct:    4 KSAEMYELKKKVEELKSYRGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKSTRKNVLGALERAMQHLKLYRKTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLKVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDDLTSNVPGKTRAGGQSARRYERIREQE 191          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_PYRAB (Peptide chain release factor subunit 1 OS=Pyrococcus abyssi GN=prf1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32
Identity = 75/190 (39.47%), Postives = 110/190 (57.89%), Query Frame = 1
Query:  184 TDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            T  + +++++KK I+ L+  RG GT +ISL +P    +S+V + L +E+ TA NIKS+  R++VL A+  A Q LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EVL  +T ++P K   GGQSA R+ R+R ++
Sbjct:    5 TRHDAQLYELKKKIEELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGNTDIRLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQE 194          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_THESM (Peptide chain release factor subunit 1 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.510e-32
Identity = 71/188 (37.77%), Postives = 110/188 (58.51%), Query Frame = 1
Query:  190 KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            K+ E++++KK ++ L+  RG  T ++SL +P    +++V + L +E+GTA NIKS+  R++VL A+  A Q LKLY + P  GL L+ G V  ++G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   EV+  +T ++P K   GGQSA R+ R+R ++
Sbjct:    4 KSAEMYELKKKVEELKKIRGRATELVSLYIPADYDLNKVMQQLREEYGTAQNIKSKTTRKNVLGALERAMQHLKLYRQTPETGLALFVGNVSEQEGVSDIRVFAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGILRGKKIEVIEDLTSNVPGKTRAGGQSARRYERIREQE 191          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_PYRFU (Peptide chain release factor subunit 1 OS=Pyrococcus furiosus GN=prf1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1
Query:  184 TDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            T ++ +++++KK I  L+  RG GT +ISL +P    +S+V + L +E+ TA NIKS+  R++VL A+  A Q LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   + +G I ++ N    G L G   EVL  +T ++P K   GGQSA R+ R+R ++
Sbjct:    5 TSRDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKEAYGLITVEKNEATIGILRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQE 194          
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_PYRHO (Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii GN=prf1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32
Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1
Query:  184 TDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARLRMEK 753
            T  + +++++KK I+ L+  RG GT +ISL +P    +S+V + L +E+ TA NIKS+  R++VL A+  A Q LKLY + P NGL L+ G V   +G          P +P+N  LY CD  F TE L E+L   D +G I ++ N    G L G   E+L  +T ++P K   GGQSA R+ R+R ++
Sbjct:    5 TRHDAQLYELKKKIEELKKIRGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEIEGNTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIELLDELTSNVPGKTRAGGQSARRYERIREQE 194          
The following BLAST results are available for this feature:
BLAST of EY693107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF1_LOXST4.364e-5654.92Eukaryotic peptide chain release factor subunit 1 ... [more]
RF1_THEVO8.556e-3642.70Peptide chain release factor subunit 1 OS=Thermopl... [more]
RF1_THEAC3.251e-3542.25Peptide chain release factor subunit 1 OS=Thermopl... [more]
RF1_METKA8.008e-3442.08Peptide chain release factor subunit 1 OS=Methanop... [more]
RF1_PYRKO3.043e-3339.36Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_THEON5.191e-3339.36Peptide chain release factor subunit 1 OS=Thermoco... [more]
RF1_PYRAB1.156e-3239.47Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_THESM1.510e-3237.77Peptide chain release factor subunit 1 OS=Thermoco... [more]
RF1_PYRFU3.365e-3238.95Peptide chain release factor subunit 1 OS=Pyrococc... [more]
RF1_PYRHO4.394e-3238.95Peptide chain release factor subunit 1 OS=Pyrococc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-H04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693107 ID=EY693107; Name=EY693107; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGGCGACGGGATTCTTCTCCTTTAGAGATTTGTCATTGGAG
GTCTTTCTTGAAGGAAGGAGAGTGACAGAAGCCGACTTTTGCTGCTGCGC
CGTCGCCGATTACCTCTCTCATCTAGAGTATATCACAGTTTCTGCAGTTT
CAACCAGTACCCACAATGTCAGATGGTCAGGAAACCGATAAGAACATAGA
GATATGGAAAATCAAAAAATTGATCAAGGCACTGGAATCTGCAAGAGGTA
ATGGAACCAGTATGATATCCCTTATTATGCCTCCACGTGATCAAATTTCT
CGGGTCACAAAGATGCTTGGTGATGAATTTGGAACTGCTTCAAACATTAA
AAGTAGGGTCAACCGTCAGTCTGTTCTGGCTGCTATTACTTCTGCTCAGC
AGAGGCTGAAGCTATATAACAAGGTTCCTCCCAATGGGCTGGTGCTTTAT
ACTGGAACAGTTGTTACTGAGGATGGCAAGGAAAAGAAAGTGACAATTGA
CTTTGAACCTTTCAAGCCTATTAATGCATCGTTGTATCTCTGTGATAACA
AGTTTCACACTGAAGCCTTGAATGAACTCTTAGAATCTGATGATAAATTT
GGGTTTATTGTCATGGATGGAAATGGCACCCTATTTGGCACATTAAGTGG
AAACACNAGAGAGGTGCTTNCATAAGTTACTGTTGATCTGCCGAANAAGC
ATGGAAGAGGAGGGCAGTCAGCTCTTCGTTTTGCTCGTCTTCGGATGGAG
AAACGCACACTATGTGAGGAAGAAGCAGAGCTTGCTACACAGTCTTATCA
ATCTGCTNACAGTCAGCAATGGTCTGGATTAANTCTGCTGGGTCTGCTGA
TTCAAACGAGCTGAGCAGTCTGATATGTTGTCCTCGT
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