EY693107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_AERPE (Peptide chain release factor subunit 1 OS=Aeropyrum pernix GN=prf1 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.558e-21 Identity = 62/193 (32.12%), Postives = 102/193 (52.85%), Query Frame = 1 Query: 166 MSDGQETDK-NIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARL 741 MS G+ ++ I ++ +L+K L+ T ++SL +PP +S V +L E+ NIK + RQ+V A+++A RL++ PPNGLVL+ G ++ K F P +PI Y D +F T+ L +++E ++ G I+++ + G L G EVL + +P KH GGQS R+ R+ Sbjct: 1 MSQGRLEERLTISKRELARLLKELKKWSAPATVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRALSAAMDRLQMLTSTPPNGLVLFCGEDMSTG---KFECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIGLLKGARLEVLKELEGFVPGKHKMGGQSQRRYERI 190
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_PYRAE (Peptide chain release factor subunit 1 OS=Pyrobaculum aerophilum GN=prf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.915e-19 Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 208 KIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFAR 738 +++ + L+ +G T++I+L + I V +L E+ TA+NIK + R V + LK K P NG+ ++ G + G + V P +PIN Y+CD FHTE L + L + +G +V++ + L G EV+ V +P KH GGQSA RF R Sbjct: 18 ELRAFVNLLKKFKGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICDTAFHTELLEDQLHAGVVYGIVVIERGEAVIALLKGGQWEVVKSVEFFVPGKHHAGGQSANRFKR 194
BLAST of EY693107 vs. ExPASy Swiss-Prot
Match: RF1_SULSO (Peptide chain release factor subunit 1 OS=Sulfolobus solfataricus GN=prf1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19 Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 208 KIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTG-TVVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLX*VTVDLPXKHGRGGQSALRFARL 741 ++K LIK L+ + T ++SL +PP I V +L E+ A NIK + R +VL+AI +A RL K+ NGLVL+ G TED K F P + Y D +FH E L +++E +G I+++ + G L G E+L + +P KH GGQS R R+ Sbjct: 12 ELKALIKELKKWKAPATVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLNKIPKIDGNGLVLFCGENFDTEDFK----CFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKGARIEILEEIEGFVPGKHMMGGQSQRRIDRI 186 The following BLAST results are available for this feature:
BLAST of EY693107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693107 ID=EY693107; Name=EY693107; organism=Citrus sinensis; type=EST; length=887bpback to top |