EY693083

Overview
NameEY693083
Unique NameEY693083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.181e-52
Identity = 99/193 (51.30%), Postives = 123/193 (63.73%), Query Frame = 3
Query:  135 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE 704
            G  + CG    G     G+L  IISR  F+D+L +RND  C ARGFYTYDAFI AAK+FP FG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYC+ ++ +  S+               YYGRGP+QL+WN NY +CG A+G DLL +   +     I  K+AIWFWMT Q PKPSCH VI+ +
Sbjct:   55 GCQSQCGGTPPG---PTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQ 244          

HSP 2 Score: 25.7942 bits (55), Expect = 1.181e-52
Identity = 12/32 (37.50%), Postives = 18/32 (56.25%), Query Frame = 2
Query:  707 KPSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            +PS  D  A R+ GY + T  I   L+C +G+
Sbjct:  246 QPSDADRAAGRVPGYGVITNIINGGLECGRGQ 277          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.381e-52
Identity = 104/197 (52.79%), Postives = 130/197 (65.99%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G +A  CGSG       TG      ++G++I+R MF D+L +RN+  C  +GFYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW  AP G YAWGYCY+R Q S G+            G +YYGRGPIQ+++N NY + G+A+GVDL+ +   +   + I  K+A WFWMT Q PKPSCH VI
Sbjct:   45 GNTADYCGSGCQSQCSSTG------DIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVI 235          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.421e-52
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = 3
Query:  198 KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            KIISR MF+ +L +RN+  C A+GFYTYDAF+ AAK+FP+FG +G+  +RKRE+AAF  QT HETTGGWP AP G YAWGYC++++ +  S+           PG+ YYGRGP+QL+WN NY  CGEAL V+LL +   +     +  K+A+WFWMT Q PKPSCH+V+
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVL 172          

HSP 2 Score: 29.261 bits (64), Expect = 3.421e-52
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R +PS  D  A RL GY + T  +   L+C KG
Sbjct:  175 RWQPSAADTAAGRLPGYGVLTNLLNGGLECGKG 207          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 5.791e-52
Identity = 103/208 (49.52%), Postives = 131/208 (62.98%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHG--------TDG---GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G +   CG G    +  +G G        T G   G++  IIS  MF+ +L +RND  C  + FYTY+AFI AA++F  FG +G+ T RKRE+AAFFAQT HETTGGW  AP G YAWGYCY+R Q +  S           PGQ YYGRGPIQ+++N NY  CG A+G +LL +   +  ++ +  KSAIWFWMTAQ PKPSCH+VI
Sbjct:   48 GNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVI 255          

HSP 2 Score: 26.5646 bits (57), Expect = 5.791e-52
Identity = 14/33 (42.42%), Postives = 16/33 (48.48%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R  PS  D  A RL GY + T  I   L+C  G
Sbjct:  258 RWTPSAADRAANRLPGYGVITNIINGGLECGHG 290          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 7.551e-52
Identity = 109/200 (54.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVII 698
            G  +Q  GSG   G          G L  +ISRE F  +L +RND  C ARGFYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYCY R+++  S            PG QY+GRGP+QL+WN NY +CG A+GVDLL +   L    TI  KSA WFWMT Q PKPSCH VII
Sbjct:   57 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVII 246          

HSP 2 Score: 26.9498 bits (58), Expect = 7.551e-52
Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            PS +D  A R+ GY + T  I   L+C KG
Sbjct:  251 PSSSDRAAGRVPGYGVITNIINGGLECGKG 280          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.553e-52
Identity = 104/198 (52.53%), Postives = 127/198 (64.14%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G +   CG G  C  +  G     G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G            PG +Y+GRGPIQ++ N NY  CG A+GVDLL +   +   S I  KSAIWFWMT Q PKPSCH+VI
Sbjct:   43 GNTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVI 239          

HSP 2 Score: 25.0238 bits (53), Expect = 7.553e-52
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R +PS  D  A R+ G+ + T  I   L+C  G
Sbjct:  242 RWQPSGADQAANRVPGFGVITNIINGGLECGHG 274          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 7.558e-52
Identity = 109/200 (54.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVII 698
            G  +Q  GSG   G          G L  +ISRE F  +L +RND  C ARGFYTYDAFI AA++FPAF  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYCY R+++  S            PG QY+GRGP+QL+WN NY +CG A+GVDLL +   L    TI  KSA WFWMT Q PKPSCH VII
Sbjct:   35 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVII 224          

HSP 2 Score: 26.9498 bits (58), Expect = 7.558e-52
Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            PS +D  A R +GY + T  I   L+C KG
Sbjct:  229 PSSSDRAAGRATGYGVITNIINGGLECGKG 258          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.181e-51
Identity = 104/198 (52.53%), Postives = 127/198 (64.14%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G +   CG G    +   G     G+LG +IS  MF+ +L +RND  C  +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++R Q S G            PG +Y+GRGPIQ++ N NY  CG A+GVDLL +   +   S I  KSAIWFWMT Q PKPSCH+VI
Sbjct:   43 GNTNDYCGPGNCQSQCPGG---SPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVI 237          

HSP 2 Score: 25.7942 bits (55), Expect = 2.181e-51
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R +PS  D  A R+ G+ + T  I   L+C  G
Sbjct:  240 RWQPSGTDQAANRVPGFGVITNIINGGLECGHG 272          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.633e-51
Identity = 103/205 (50.24%), Postives = 130/205 (63.41%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE*N 710
            G +   CGSG  C  +  G G     GG+LG  IS  MF+ +L +RN+  C  + FY+Y+AFI AA++FP FG SG+   RKREIAAFFAQT HETTGGW  AP G YAWGYC++R+  +  D           PG +Y+GRGPIQ++ N NY  CG A+GVDLL +   +     I  K+A+WFWMT Q PKPSCH+VII   N
Sbjct:   51 GNTNDYCGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWN 254          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.705e-51
Identity = 102/198 (51.52%), Postives = 127/198 (64.14%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G + + CG G  C  +  G     G+LG +IS  MF+ +L +RND  C  +  FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G            PG +Y+GRGPIQ++ N NY  CG A+GVDLL +   +     I  KSAIWFWMT Q PKPSCH+VI
Sbjct:   47 GNTNEYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVI 243          

HSP 2 Score: 25.0238 bits (53), Expect = 3.705e-51
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R +PS  D  A R+ G+ + T  I   L+C  G
Sbjct:  246 RWQPSGADQAANRVPGFGVITNIINGGLECGHG 278          
The following BLAST results are available for this feature:
BLAST of EY693083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_BRANA1.181e-5251.30Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIB_VITVI2.381e-5252.79Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHIT_CARPA3.421e-5254.44Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI3_TOBAC5.791e-5249.52Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI1_GOSHI7.551e-5254.50Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI3_SOLTU7.553e-5252.53Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_GOSHI7.558e-5254.50Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI2_SOLTU2.181e-5152.53Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_SOLTU2.633e-5150.24Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHIC_SOLLC3.705e-5151.52Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693083 ID=EY693083; Name=EY693083; organism=Citrus sinensis; type=EST; length=927bp
TCCGACCCACGCGTCCGCCCACGCGTCCGATAATTGATATCATAACTCTT
GCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCTCTCTAGTTTT
ATCTTTTGTACAAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGCTGTGT
GCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGAACTGGGCAAG
ATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATAGAAATGATGA
ACGATGCCATGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAG
CCAAAGCTTTTCCAGCCTTTGGTAACTCTGGAAATGAAACCATGCGTAAA
AGAGAAATTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGG
ATGGCCCGATGCACCTGGTGGAGAATATGCTTGGGGATATTGCTATATTA
GGCAAGTTAGCCATGGGTCCGACTACTGTTATCCTTACTGTCCATGTCCC
TTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTG
CAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAAACATC
AGACCTTCTTGCACTGATCCAGTACTATCATCAAGTCAGCAATCTGGTTC
TGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGA
CGAATGAAACCATCAGNCAATGACGTAAACGCCAGGCGGCTTTCGGGATA
CNGTCTAACCACAATANTAATCACGNTGGAATTGAAATGTGCCAAAGGTG
AATGCTTTTTAGCTAACGTATTGGTTCTTAACACCTTCTGTGGCAGTTGG
NATCANNCTGCGACATCTTGATGCTACACCAGGNCTTTATGCCCTATTTG
ATGCCAATCATGGATCATCTGACNACT
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