EY693083

Overview
NameEY693083
Unique NameEY693083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.261e-48
Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 3
Query:  177 TDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            T GG++G+++   +F+ +L YRND RC   GFYTYDAFI AA++F  FG +G++  +K+E+AAF AQT HETTGGWP AP G YAWGYC++ + +              PG +YYGRGPIQLT N NY   G+A+  DL+ +   L  + T+  K+AIWFWMT Q  KPS H+VI
Sbjct:   75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVI 249          

HSP 2 Score: 26.1794 bits (56), Expect = 1.261e-48
Identity = 12/34 (35.29%), Postives = 18/34 (52.94%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            R  PS  D +A R+ GY + T  I   ++C  G+
Sbjct:  252 RWTPSAADSSAGRVPGYGVITNIINGGIECGHGQ 285          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.141e-48
Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G ++  CG G  C  + +G G          +DG  +G I+ R++FE LL +RND  C ARGFYTY+AF+ AA AFPAFG +GN   RKRE+AAF  QT HETTGGWP AP G ++WGYC+ ++ +  SD           PG +YYGRGPIQL++N NY   G A+GVDLL +   +   +T+  K+A+WFWMT Q  KPS H+VI
Sbjct:   57 GTTSDFCGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVI 259          

HSP 2 Score: 24.6386 bits (52), Expect = 2.141e-48
Identity = 12/33 (36.36%), Postives = 15/33 (45.45%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            R  PS  D  A R  GY + T  +   L+C  G
Sbjct:  262 RWAPSPADAAAGRAPGYGVITNIVNGGLECGHG 294          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.742e-48
Identity = 93/192 (48.44%), Postives = 120/192 (62.50%), Query Frame = 3
Query:  135 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G G   G    G G  GG +  ++S+E+FE LL +RND  C ARGFYTYDA + AA AFP F  +G++  RKRE+AAF  QT HETTGGW  AP G Y+WGYC+  ++  G+           P     +Y+GRGPIQL++N NY   GEA+G DLL +   +     +  K+A+WFWMT Q PKPSCH+VI
Sbjct:   67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEI--GATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVI 256          

HSP 2 Score: 25.7942 bits (55), Expect = 4.742e-48
Identity = 12/30 (40.00%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            PS  D+ A R+ GY + T  I   L+C  G
Sbjct:  262 PSSGDIAAGRVPGYGVITNIINGGLECGFG 291          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.070e-48
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            GT  G +  I+SR  F+ +L +RND  C A+GFYTYDAF+ AA AFP FG +G+   +KRE+AAF AQT HETTGGW  AP G +AWGYC+ ++    SD           PG +YYGRGPIQL+ N NY   G A+GVDLL +   +   +T+  K+AIWFWMTAQPPKPS H VI
Sbjct:   19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVI 195          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.711e-47
Identity = 100/207 (48.31%), Postives = 128/207 (61.84%), Query Frame = 3
Query:  114 GGSAQNCGSG-----AVCGE-----RDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G ++  CG G     A CG        T   + GG +  I+SR +F+ +L +RND  C A+GFYTYDAF+ AA AFP FG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYC+ ++    S+           PG+ YYGRGPIQL+ N NY   G A+GVDLL++   +    T+  K+A+WFWMTAQ PKPS H VI
Sbjct:   44 GSTSDYCGDGCQSQCAGCGGGGTPVTPTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVI 250          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.711e-47
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 3
Query:  114 GGSAQNCGSGAV------CGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G ++  CG+G        CG   T   + GG  +  IIS  +F+ +L +RND+ C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF AQT HETTGGWP AP G Y+WGYC+ ++ ++G+           P     +YYGRGPIQ+T+N NY   G+A+G DLL +   +   +T+  K+A WFWMT Q PKPSCH VI
Sbjct:   43 GSTSDYCGAGCQSQCSGGCGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCF-KEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVI 247          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 186.037 bits (471), Expect = 2.550e-46
Identity = 99/206 (48.06%), Postives = 126/206 (61.17%), Query Frame = 3
Query:  117 GSAQNCGSGAVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            GS   CG G  C  + +G G          + GG +  I+SR +F+ +L +RND  C A+GFYTYDAF+ AA AF  FG +G    RKRE+AAF AQT HETTGGW  AP G +AWGYC+ ++    S+           PG+ YYGRGPIQL+ N NY   G A+GVDLL++   +    T+  K+A+WFWMTAQ PKPS H VI
Sbjct:   44 GSTPYCGDG--CQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVI 247          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.350e-46
Identity = 92/177 (51.98%), Postives = 116/177 (65.54%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            GT  G +  IIS   F+ +L +RND  C A+GFYTYDAF+ AA AFP FG +G+   RKR++AAF AQT HETTGGW  AP G +AWGYC+ ++    +D           PG +YYGRGPIQL+ N NY   G A+GVDLL++   +    T+  K+A+WFWMTAQ PKPS H VI
Sbjct:   19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVI 195          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.602e-46
Identity = 86/172 (50.00%), Postives = 112/172 (65.12%), Query Frame = 3
Query:  192 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE 704
            +G II+R MFE +L +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF QT HETTGGW  AP G +AWGYC + +++                 YYGRGPIQLT   NY   G+ALG+DL+ +   +     +  ++AIWFWMTAQ PKPSCH+VI ++
Sbjct:   27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQ 185          

HSP 2 Score: 26.1794 bits (56), Expect = 5.602e-46
Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            PS +D ++ RL GY + T  I    +C KG
Sbjct:  188 PSGDDRSSGRLPGYGMATNIINGGEECGKG 217          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.809e-45
Identity = 94/207 (45.41%), Postives = 125/207 (60.39%), Query Frame = 3
Query:  114 GGSAQNCGSGAV------CGERDTGHGTDGGELG--KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSH--GSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G ++  CGSG        CG       + GG  G   I+SR +F+ +L +RND  C A+ FYTYDAF+ AA AFP+F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYC+  + +   GSD              +YYGRGPIQ+++N NY   G+A+G +LL +   +   +T+  K+A WFWMT Q PKPSCH V+
Sbjct:   45 GSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVM 251          
The following BLAST results are available for this feature:
BLAST of EY693083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIX_PEA1.261e-4850.29Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_ORYSJ2.141e-4848.79Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI9_ORYSJ4.742e-4848.44Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_HORVU6.070e-4853.6726 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHIA_SECCE6.711e-4748.31Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI3_ORYSJ6.711e-4746.12Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_HORVU2.550e-4648.0626 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHIC_SECCE4.350e-4651.98Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI11_ORYSJ5.602e-4650.00Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI1_ORYSJ4.809e-4545.41Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693083 ID=EY693083; Name=EY693083; organism=Citrus sinensis; type=EST; length=927bp
TCCGACCCACGCGTCCGCCCACGCGTCCGATAATTGATATCATAACTCTT
GCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCTCTCTAGTTTT
ATCTTTTGTACAAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGCTGTGT
GCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGAACTGGGCAAG
ATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATAGAAATGATGA
ACGATGCCATGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAG
CCAAAGCTTTTCCAGCCTTTGGTAACTCTGGAAATGAAACCATGCGTAAA
AGAGAAATTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGG
ATGGCCCGATGCACCTGGTGGAGAATATGCTTGGGGATATTGCTATATTA
GGCAAGTTAGCCATGGGTCCGACTACTGTTATCCTTACTGTCCATGTCCC
TTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTG
CAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAAACATC
AGACCTTCTTGCACTGATCCAGTACTATCATCAAGTCAGCAATCTGGTTC
TGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGA
CGAATGAAACCATCAGNCAATGACGTAAACGCCAGGCGGCTTTCGGGATA
CNGTCTAACCACAATANTAATCACGNTGGAATTGAAATGTGCCAAAGGTG
AATGCTTTTTAGCTAACGTATTGGTTCTTAACACCTTCTGTGGCAGTTGG
NATCANNCTGCGACATCTTGATGCTACACCAGGNCTTTATGCCCTATTTG
ATGCCAATCATGGATCATCTGACNACT
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