EY693083

Overview
NameEY693083
Unique NameEY693083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.203e-45
Identity = 88/171 (51.46%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  192 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            +  +IS+ +FE +L +RND  C A+GFYTY+AFI A K F AFG +G+   R +EIAAF AQT HETTGGW  AP G Y+WGYCY R Q S G            PG +Y+GRGPIQ+++N NY   G A+GV+LL +   +   + +  K+A+WFWMTAQ PKPS H+VI
Sbjct:    5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVI 175          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.340e-44
Identity = 90/197 (45.69%), Postives = 113/197 (57.36%), Query Frame = 3
Query:  120 SAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP----GQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEV 692
            SA  CG G       +G    G  +  I+SR +F+ +L +RND  C A  FYTYDAF+ AA AFP F  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYC+  +    +           P     +YYGRGPIQL++N NY   G+A+G DLL     +   +T+   +A WFWMT Q PKPSCH V
Sbjct:   61 SAAGCGGGGPTPPSGSG----GSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAV 253          

HSP 2 Score: 26.9498 bits (58), Expect = 1.340e-44
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            PS +D  A R+ GY + T  I   L+C  GE
Sbjct:  260 PSADDQAAGRVPGYGVITNIINGGLECGHGE 290          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.586e-44
Identity = 85/175 (48.57%), Postives = 117/175 (66.86%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            G+   ++G I++ ++F ++L  RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   A  G +A GYC++R+ +             +   +YGRGPIQLT   NY   G+A+G DL+ +   +   +T+  K+AIWFWMTAQ  KPSCH+VI
Sbjct:   13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQ------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVI 174          

HSP 2 Score: 27.7202 bits (60), Expect = 8.586e-44
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            PS  D +A R  GY + T  I   ++C KG+
Sbjct:  180 PSAADASANRQPGYGVITNIINGGIECGKGQ 210          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.137e-43
Identity = 87/180 (48.33%), Postives = 113/180 (62.78%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE 704
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC++RQ+                 +YYGRGPIQLT   NY R G+ +GV  DL+ +   +     I  ++AIWFWMTAQ  KPSCH VII +
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQ 183          

HSP 2 Score: 24.6386 bits (52), Expect = 7.137e-43
Identity = 12/30 (40.00%), Postives = 15/30 (50.00%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            PS  D  A R+ GY + T  I   L+C  G
Sbjct:  186 PSPADTAANRVPGYGVITNIINGGLECNMG 215          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.301e-43
Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            GT    +G I++ ++F+ +L  RND RC A  FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG   +P G YA GYC++R+ +             +   YYGRGPIQLT   NY   G+A+  DL+ +   +   +T+  K+AIWFWMT Q  KPSCH+VI
Sbjct:   20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQ------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVI 181          

HSP 2 Score: 30.0314 bits (66), Expect = 9.301e-43
Identity = 13/34 (38.24%), Postives = 19/34 (55.88%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            R  PS  D +A R+ GY + T  I   ++C KG+
Sbjct:  184 RWTPSAADTSANRVPGYGVITNIINGGIECGKGQ 217          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.186e-41
Identity = 85/180 (47.22%), Postives = 112/180 (62.22%), Query Frame = 3
Query:  174 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE 704
            GT     G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG      G +  GYC+++Q+                 +YYGRGPIQLT   NY R G+ +GV  +L+ +   +     I  K+AIWFWMT Q  KPSCH VII +
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQ 183          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.851e-40
Identity = 83/191 (43.46%), Postives = 116/191 (60.73%), Query Frame = 3
Query:  132 CGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVII 698
            C + ++     +G    G  +G +I++ +F  +LP R++ +C ARGFYTYDAFI AA +FPAFG SG    + +RE+AAFF QT HETTGG       ++ WGYC+  +++  +              YYGRGPIQLT   NY   G ALG+DL+ +   +   + +  K+AIWFWMTAQ  KPSCH+VI+
Sbjct:   14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP-----------PYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVIL 190          

HSP 2 Score: 25.409 bits (54), Expect = 1.851e-40
Identity = 12/34 (35.29%), Postives = 17/34 (50.00%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            R  PS  D  A R+ GY + T  I   ++C  G+
Sbjct:  192 RWTPSAADTAAGRVPGYGVITNIINGGIECGVGQ 225          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.038e-39
Identity = 80/183 (43.72%), Postives = 111/183 (60.66%), Query Frame = 3
Query:  168 GHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD--XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIIDE 704
            G+      +  I+S +++  L  +++D  C ARGFYTY +F+ AA  FP F  +G    RKRE+AAF AQ  HETTGGW  AP G YAWG CY  +++  S             PG+ Y+GRGPIQ++WN NY   G+ALG D L++   +   S I  ++A+WFWMT +  KPSCH+V++ E
Sbjct:   41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGE 223          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.538e-39
Identity = 82/170 (48.24%), Postives = 108/170 (63.53%), Query Frame = 3
Query:  192 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVII 698
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+G +L+ +   +   +TI  K+AIWFWMT Q  KPS H+VII
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVII 181          

HSP 2 Score: 24.6386 bits (52), Expect = 1.538e-39
Identity = 15/42 (35.71%), Postives = 19/42 (45.24%), Query Frame = 2
Query:  683 PRSH---YRRMKPSXNDVNARRLSGYXLTTIXITXELKCAKG 799
            P SH     R  PS  D  A R+ GY + T  I   ++C  G
Sbjct:  174 PSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIG 215          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.998e-39
Identity = 85/190 (44.74%), Postives = 102/190 (53.68%), Query Frame = 3
Query:  135 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIID 701
            G G   G    G G   G L  II   MF+D+L YRND +C A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HET G WP A G +Y WGYC++                                N NY  CG+ L + LL+    +     I  K+A+WFWMT Q PKPSCH VI +
Sbjct:   66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM--------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITE 223          

HSP 2 Score: 25.409 bits (54), Expect = 1.998e-39
Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKGECFLAN---VLVLNTFCGS 847
            PS  D  A R+ GY + T  I   ++C +G    AN   +    T+C S
Sbjct:  227 PSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDS 275          
The following BLAST results are available for this feature:
BLAST of EY693083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHID_SOLLC8.203e-4551.46Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI12_ORYSJ1.340e-4445.69Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC8.586e-4448.57Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLCI7.137e-4348.33Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIT_PETHY9.301e-4348.57Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHIA_SOLLC7.186e-4147.22Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI8_ORYSJ1.851e-4043.46Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI10_ORYSJ1.038e-3943.72Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIQ_TOBAC1.538e-3948.24Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIB_POPTR1.998e-3944.74Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693083 ID=EY693083; Name=EY693083; organism=Citrus sinensis; type=EST; length=927bp
TCCGACCCACGCGTCCGCCCACGCGTCCGATAATTGATATCATAACTCTT
GCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCTCTCTAGTTTT
ATCTTTTGTACAAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGCTGTGT
GCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGAACTGGGCAAG
ATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATAGAAATGATGA
ACGATGCCATGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAG
CCAAAGCTTTTCCAGCCTTTGGTAACTCTGGAAATGAAACCATGCGTAAA
AGAGAAATTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGG
ATGGCCCGATGCACCTGGTGGAGAATATGCTTGGGGATATTGCTATATTA
GGCAAGTTAGCCATGGGTCCGACTACTGTTATCCTTACTGTCCATGTCCC
TTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTG
CAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAAACATC
AGACCTTCTTGCACTGATCCAGTACTATCATCAAGTCAGCAATCTGGTTC
TGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGA
CGAATGAAACCATCAGNCAATGACGTAAACGCCAGGCGGCTTTCGGGATA
CNGTCTAACCACAATANTAATCACGNTGGAATTGAAATGTGCCAAAGGTG
AATGCTTTTTAGCTAACGTATTGGTTCTTAACACCTTCTGTGGCAGTTGG
NATCANNCTGCGACATCTTGATGCTACACCAGGNCTTTATGCCCTATTTG
ATGCCAATCATGGATCATCTGACNACT
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