EY693083

Overview
NameEY693083
Unique NameEY693083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.498e-38
Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 3
Query:  192 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVII 698
            +G I++ ++F ++L  RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG   A    +  GYC++RQ                  +YYGRGPIQLT   NY + G A+  DL+ +   +   +TI  K+AIWFWMT Q  KPS H+VII
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVII 181          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.836e-38
Identity = 79/169 (46.75%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  192 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVI 695
            +  +IS  +FE +L +R        GFYTYDAFI AAK+FPAF  +G+  +RKRE+AAF AQT HETTGGWP AP G Y  G                         Y+GRGPIQ+++N NY   G+A+GVDLL++   +   +T+  K+A+WFWMT Q PKPS H+VI
Sbjct:    1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------------------STSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVI 140          

HSP 2 Score: 27.7202 bits (60), Expect = 2.836e-38
Identity = 13/34 (38.24%), Postives = 18/34 (52.94%), Query Frame = 2
Query:  701 RMKPSXNDVNARRLSGYXLTTIXITXELKCAKGE 802
            R  PS  D  A R+ GY + T  I   ++C KG+
Sbjct:  143 RWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQ 176          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.253e-36
Identity = 82/205 (40.00%), Postives = 112/205 (54.63%), Query Frame = 3
Query:  111 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQ-PPKPSCHEVI 695
            +GG    C      G+ D      T  G     +  +++ + FE +LP+R+D  C ARGFY Y AF+ AA AFPAF  +G+   RKRE+AAF AQT H T+       GG Y+WGYCY       SD           PG+ Y+ RGP+Q+ +N NY   GEA+G DLL +   +    T+  K+A+W WMTA+ P +PS H V+
Sbjct:   64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVV 261          

HSP 2 Score: 28.8758 bits (63), Expect = 7.253e-36
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKGECFLANVLVLNTFC 841
            P+  D  A R  GY LTT  +T  L+CA G      V     +C
Sbjct:  267 PTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGADRVAFYKRYC 310          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.253e-36
Identity = 82/205 (40.00%), Postives = 112/205 (54.63%), Query Frame = 3
Query:  111 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQ-PPKPSCHEVI 695
            +GG    C      G+ D      T  G     +  +++ + FE +LP+R+D  C ARGFY Y AF+ AA AFPAF  +G+   RKRE+AAF AQT H T+       GG Y+WGYCY       SD           PG+ Y+ RGP+Q+ +N NY   GEA+G DLL +   +    T+  K+A+W WMTA+ P +PS H V+
Sbjct:   64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVV 261          

HSP 2 Score: 28.8758 bits (63), Expect = 7.253e-36
Identity = 16/44 (36.36%), Postives = 20/44 (45.45%), Query Frame = 2
Query:  710 PSXNDVNARRLSGYXLTTIXITXELKCAKGECFLANVLVLNTFC 841
            P+  D  A R  GY LTT  +T  L+CA G      V     +C
Sbjct:  267 PTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGADRVAFYKRYC 310          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.988e-34
Identity = 72/170 (42.35%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  207 SREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPP-KPSCHEVIIDE 704
            +  MFE +LP RN++ C  +GFYTYDA+  A + +P FG +G++  RKRE+AAFFAQT  ET+G         + WGYC + +++  SD          P    YYGRGP+QL WN NY  CG  LG +LL     +     +  ++A+WFWM       PSCHEVI  E
Sbjct:   68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGE 237          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 2.651e-27
Identity = 71/201 (35.32%), Postives = 110/201 (54.73%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERD--TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVS-HGSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPPKPSCHEVIID 701
            G   Q   S +V G R   +G+ T       +++  +F+ +  +R D  C ++GFY+Y +F+ AA++FPAFG  G+   RKRE+AAF A     T+G   D     +AWG C+I   +   +D           G+ Y  RGPIQLT N NY   G+A+G DL+++   +     I  K+A+WFWM+    KPSCH+++++
Sbjct:  102 GSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.274e-21
Identity = 63/185 (34.05%), Postives = 93/185 (50.27%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFW 653
            G  +  CG+G   G  D    T+   +  I++ E F  L+  + D+ C A+GFYT DAF+ AA  +P+FG +G+    KREIAAFFA   HET               +CYI ++   S           P      YYGRGP+Q++WN NY   G+++G D L     +  S  +  ++A+W+W
Sbjct:   43 GTGSDYCGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 63/195 (32.31%), Postives = 93/195 (47.69%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTAQPP 671
            G +   CG+G   G   +  GT     GG +G I+++  F  ++       C  + FYT D+FI AA  FP F NS    + +REIA  FA   HET               +CYI +++  S           P      Y+GRGPIQL+WN NY  CG++L ++LL     +  + T+  ++ +WFWM +  P
Sbjct:   42 GSTDAYCGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20
Identity = 58/192 (30.21%), Postives = 89/192 (46.35%), Query Frame = 3
Query:  114 GGSAQNCGSGAVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLKHQTFLH*SSTI-IKSAIWFWMTA 662
            G + + CG G   G   +G G  G       +  +++   F  +   +    C  + FYT  AF+ A K +P F + G++   KREIAAFFA   HET               +CYI +++  +   D            +YYGRGP+Q++WN NY   G A+G D L     +   + +  K+A+WFWM +
Sbjct:   38 GTTDEYCGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215          
BLAST of EY693083 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.010e-18
Identity = 67/191 (35.08%), Postives = 89/191 (46.60%), Query Frame = 3
Query:  129 NCGSGAVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWP-DAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLKH-QTFLH*SSTIIKSAIWFWMT 659
            NC SG   G   T           G G  G  +  I+S+  F+ ++  +    C  + FYT  AF+ A    P FGN G+    KREIAAFFA   HETT     +   G+    YC         D           G+ YYGRGP+QL+WN NY   G+A+G D L + +      +T  K+A+WFWMT
Sbjct:   55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYC---------DQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233          
The following BLAST results are available for this feature:
BLAST of EY693083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIP_TOBAC1.498e-3848.82Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIT_AVESA2.836e-3846.75Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI7_ORYSJ7.253e-3640.00Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI7.253e-3640.00Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI8_POPTR4.988e-3442.35Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
AGI_URTDI2.651e-2735.32Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI6_ORYSJ1.274e-2134.05Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_BRANA2.403e-2032.31Basic endochitinase CHB4 OS=Brassica napus PE=1 SV... [more]
CHIB_MAIZE6.993e-2030.21Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHIP_BETVU1.010e-1835.08Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693083 ID=EY693083; Name=EY693083; organism=Citrus sinensis; type=EST; length=927bp
TCCGACCCACGCGTCCGCCCACGCGTCCGATAATTGATATCATAACTCTT
GCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCTCTCTAGTTTT
ATCTTTTGTACAAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGCTGTGT
GCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGAACTGGGCAAG
ATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATAGAAATGATGA
ACGATGCCATGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAG
CCAAAGCTTTTCCAGCCTTTGGTAACTCTGGAAATGAAACCATGCGTAAA
AGAGAAATTGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGG
ATGGCCCGATGCACCTGGTGGAGAATATGCTTGGGGATATTGCTATATTA
GGCAAGTTAGCCATGGGTCCGACTACTGTTATCCTTACTGTCCATGTCCC
TTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTG
CAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAAACATC
AGACCTTCTTGCACTGATCCAGTACTATCATCAAGTCAGCAATCTGGTTC
TGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGA
CGAATGAAACCATCAGNCAATGACGTAAACGCCAGGCGGCTTTCGGGATA
CNGTCTAACCACAATANTAATCACGNTGGAATTGAAATGTGCCAAAGGTG
AATGCTTTTTAGCTAACGTATTGGTTCTTAACACCTTCTGTGGCAGTTGG
NATCANNCTGCGACATCTTGATGCTACACCAGGNCTTTATGCCCTATTTG
ATGCCAATCATGGATCATCTGACNACT
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