EY693082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.365e-93 Identity = 161/216 (74.54%), Postives = 178/216 (82.41%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MAT + S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP AFAELKV Sbjct: 1 MATCAIQ-QSAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV 211 HSP 2 Score: 44.669 bits (104), Expect = 1.365e-93 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 1.365e-93 Identity = 162/223 (72.65%), Postives = 181/223 (81.17%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP FAELKV E K G Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKV--KELKNG 215 HSP 2 Score: 43.8986 bits (102), Expect = 1.365e-93 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 1.365e-93 Identity = 162/223 (72.65%), Postives = 181/223 (81.17%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP FAELKV E K G Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKV--KELKNG 215 HSP 2 Score: 43.8986 bits (102), Expect = 1.365e-93 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 6.727e-93 Identity = 160/215 (74.42%), Postives = 175/215 (81.40%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG +EGYR+ GG LGE DPL PGG+FDPLGLADDP A AELKV Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKV 212 HSP 2 Score: 45.0542 bits (105), Expect = 6.727e-93 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 8.775e-93 Identity = 159/216 (73.61%), Postives = 177/216 (81.94%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MATS + S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG +EGYR+ GGPLGE D +YPGG+FDPLGLADDP AFAELKV Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV 211 HSP 2 Score: 43.8986 bits (102), Expect = 8.775e-93 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 1.253e-91 Identity = 159/216 (73.61%), Postives = 175/216 (81.02%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MATS + S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP AFAELKV Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV 211 HSP 2 Score: 43.8986 bits (102), Expect = 1.253e-91 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 2.134e-91 Identity = 148/182 (81.32%), Postives = 162/182 (89.01%), Query Frame = 2 Query: 137 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP AFAELKV Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV 183 HSP 2 Score: 44.669 bits (104), Expect = 2.134e-91 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 187 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 3.628e-91 Identity = 150/181 (82.87%), Postives = 163/181 (90.06%), Query Frame = 2 Query: 140 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDP AFAELKV Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKV 210 HSP 2 Score: 44.669 bits (104), Expect = 3.628e-91 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.792e-90 Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 2 Query: 227 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP AFAELKV E K G Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV--KELKNG 158 HSP 2 Score: 45.8246 bits (107), Expect = 1.792e-90 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 156 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.043e-90 Identity = 163/224 (72.77%), Postives = 177/224 (79.02%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL----SNGG--RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 MATS + S+F GK GNE N G R +MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP +FAELKV E K G Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKV--KELKNG 217 HSP 2 Score: 42.3578 bits (98), Expect = 3.043e-90 Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA 812 +NG++AM MFGFF QAIVTGKGP + + P +AWA Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWA 256 The following BLAST results are available for this feature:
BLAST of EY693082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693082 ID=EY693082; Name=EY693082; organism=Citrus sinensis; type=EST; length=907bpback to top |