EY693077

Overview
NameEY693077
Unique NameEY693077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_ERWT9 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=aroA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.027e-40
Identity = 83/148 (56.08%), Postives = 103/148 (69.59%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVL 455
            EKMGA V W ++ +  T        R  L AVD++MN +PD AMT+A  ALFA G T +R++ +WRVKET+R+ A+ TELRK+GA VEEG D+  ITPP K+  A I TY+DHRMAM FSL A +  PVTI DP CT KTFPDYF+ L
Sbjct:  282 EKMGASVEWGDDYIACT--------RGDLNAVDLDMNHIPDAAMTIATTALFAQGTTVMRNIYNWRVKETDRLTAMATELRKVGAEVEEGHDFISITPPAKIVFAEIGTYNDHRMAMCFSLVALSSSPVTILDPKCTAKTFPDYFEQL 421          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_YERRU (3-phosphoshikimate 1-carboxyvinyltransferase OS=Yersinia ruckeri GN=aroA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.648e-40
Identity = 82/148 (55.41%), Postives = 103/148 (69.59%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVL 455
            EKMGA + W ++ +  +        R  LR +D++MN +PD AMT+A  ALFA GPT IR++ +WRVKET+R+ A+ TELRK+GA VEEG DY  + PP  L  A I TY+DHRMAM FSL A +D PVTI DP CT KTFPDYF+ L
Sbjct:  281 EKMGAIIHWGDDYIECS--------RGELRDIDMDMNHIPDAAMTIATAALFAKGPTIIRNIYNWRVKETDRLSAMATELRKVGAEVEEGQDYIRVVPPAHLIAAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL 420          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEB9 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella baltica (strain OS195) GN=aroA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.648e-40
Identity = 80/145 (55.17%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA++ W ++ +   G          L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGAEIEWGDDYIIARG--------SQLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEB5 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40
Identity = 80/145 (55.17%), Postives = 100/145 (68.97%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G          L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARG--------SQLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEB2 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella baltica (strain OS223) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40
Identity = 80/145 (55.17%), Postives = 100/145 (68.97%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G          L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARG--------SQLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_ERWCT (3-phosphoshikimate 1-carboxyvinyltransferase OS=Erwinia carotovora subsp. atroseptica GN=aroA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40
Identity = 85/149 (57.05%), Postives = 103/149 (69.13%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADG-PTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVL 455
            EKMGA V W E+ +           R  L A+D++MN +PD AMT+A  ALFA G  T +R++ +WRVKET+R+ A+  ELRK+GA VEEG DY  ITPP KLK A I TY+DHRMAM FSL A +D PVTI DP CT KTFPDYF+ L
Sbjct:  282 EKMGAIVRWGEDYIECE--------RGELHAIDMDMNHIPDAAMTIATAALFAQGGTTTLRNIYNWRVKETDRLAAMAIELRKVGAEVEEGNDYIRITPPAKLKAAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL 422          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEHH (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.898e-40
Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSV 464
            E+MGA + W ++ +           +  L+AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA V+EG DY  +TPP KL  AAIDTY+DHRMAM FS+ A AD  +TI +P CT KTFPDYF+  +++
Sbjct:  282 EQMGADIEWGDDYIIAR--------QAKLKAVDLDMNHIPDAAMTIATAALFATGTTRIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISVTPPAKLNTAAIDTYNDHRMAMCFSMMAFADCGITINEPECTSKTFPDYFNQFNAL 424          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEB8 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella baltica (strain OS185) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.898e-40
Identity = 80/145 (55.17%), Postives = 100/145 (68.97%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G          L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARG--------SQLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPVVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_MARMS (3-phosphoshikimate 1-carboxyvinyltransferase OS=Marinomonas sp. (strain MWYL1) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.898e-40
Identity = 80/150 (53.33%), Postives = 105/150 (70.00%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSV 464
            +MGAK+T+        GP      R  L  +D++MN +PD AMT+A  ALFA GPT IR++ +WRVKET+R+ A+ TEL+KLGA V EG D+  +TP   LK AAIDTY+DHR+AM FSL A +D PVTI DP CT KTFP YF++ +++
Sbjct:  282 QMGAKITY--------GPSWIEAERNELNGIDMDMNHIPDAAMTIATTALFAKGPTTIRNIYNWRVKETDRLYAMATELKKLGADVIEGKDFITVTPVANLKHAAIDTYNDHRIAMCFSLVAFSDTPVTINDPGCTSKTFPTYFELFNTI 423          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_RALEJ (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia eutropha (strain JMP134) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.703e-40
Identity = 87/154 (56.49%), Postives = 106/154 (68.83%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAA--IDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA G T + ++ASWRVKET+R+ A+ TELRKLGATVEEG DY  +TPP + +  A  I TYDDHRMAM FSLAA   +PV I DP C  KTFPDYF V   VT+
Sbjct:  284 RMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAGGTTTLTNIASWRVKETDRISAMATELRKLGATVEEGADYLKVTPPAQWQTPADGIGTYDDHRMAMCFSLAAFGPLPVRINDPGCVAKTFPDYFAVFGGVTR 434          
The following BLAST results are available for this feature:
BLAST of EY693077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
AROA_ERWT92.027e-4056.083-phosphoshikimate 1-carboxyvinyltransferase OS=Er... [more]
AROA_YERRU2.648e-4055.413-phosphoshikimate 1-carboxyvinyltransferase OS=Ye... [more]
AROA_SHEB92.648e-4055.173-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEB54.516e-4055.173-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEB24.516e-4055.173-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_ERWCT4.516e-4057.053-phosphoshikimate 1-carboxyvinyltransferase OS=Er... [more]
AROA_SHEHH5.898e-4051.663-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEB85.898e-4055.173-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_MARMS5.898e-4053.333-phosphoshikimate 1-carboxyvinyltransferase OS=Ma... [more]
AROA_RALEJ7.703e-4056.493-phosphoshikimate 1-carboxyvinyltransferase OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693077 ID=EY693077; Name=EY693077; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGGAGAAAATGGGTGCCAAAGTTACCTGGACTGAAAACAGT
GTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAACACTTGCG
TGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATGACTCTAG
CTGTAGTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGATGTGGCA
AGTTGGAGAGTGAAAGAAACTGAAAGGATGATTGCTATTTGCACAGAACT
CAGAAAGTTGGGAGCAACAGTTGAAGAAGGACCAGACTACTGTGTGATCA
CCCCACCTGAGAAACTAAAAGTAGCAGCGATTGACACTTATGATGACCAC
CGGATGGCCATGGCATTCTCTCTAGCTGCTTGTGCTGATGTTCCAGTCAC
CATTAAGGATCCTAGTTGCACCAGGAAAACTTTCCCCGACTATTTCGATG
TGCTCGACAGTGTCACGAAGCGTTAAACAGCTCTTCCACATTTCTCATGA
GAGAGAGACTTCTCACCTCCATCAACCGACGAGAACAGCAAAACCACCCT
GTAACTTGCATGGCCTTGTAATTGCCAATAATTATGTGTAAGTTGAGCAT
GTTATTTTTACGAGGACCGAGTGTTTTTTGTTTTACAAATTTANGATGAG
TTTGTTTGGTCCTATCTTGTAAGATTAAATTTGAAATGAACTAATATTAC
TCCAGTGANGTCACTTCGACGTACCAATTAGTCATTGAACACNAGTATAA
AAAAAAAAAAAAGGG
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