EY693077

Overview
NameEY693077
Unique NameEY693077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_CUPTR (3-phosphoshikimate 1-carboxyvinyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.703e-40
Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAA--IDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA+G T + ++ASWRVKET+R+ A+ TELRKLGA VEEG DY  +TPP+  +  A  I TYDDHRMAM FSLAA   +PV I DP C  KTFPDYF V   VT+
Sbjct:  284 RMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAEGTTTLTNIASWRVKETDRIAAMATELRKLGAVVEEGADYLRVTPPQPWQTPADGIGTYDDHRMAMCFSLAAFGPLPVRINDPGCVAKTFPDYFSVFAGVTR 434          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURPP (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=aroA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.703e-40
Identity = 84/146 (57.53%), Postives = 103/146 (70.55%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFD 449
            KMGA +   ++ + V G   D      L  +D++ N +PD AMT+AV ALFADG T +R++ASWRVKET+R+ A+ TELRK+GA V+EG DY VI PPEKL   AAIDTYDDHRMAM FSL +   VPV I DP C  KTFPDYF+
Sbjct:  284 KMGANLQMGDDWIEVRGVGHDS---GKLEPIDMDCNLIPDAAMTIAVAALFADGATTLRNIASWRVKETDRLAAMATELRKVGAKVQEGEDYLVIEPPEKLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFE 426          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_AERSA (3-phosphoshikimate 1-carboxyvinyltransferase OS=Aeromonas salmonicida GN=aroA PE=3 SV=4)

HSP 1 Score: 164.081 bits (414), Expect = 7.703e-40
Identity = 80/153 (52.29%), Postives = 108/153 (70.59%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            E+MGA++TW ++ +     P        L  VD++MN +PD AMT+A VALFA+GPT+IR++ +WRVKET+R+ A+ T++RKLG + E    Y  +TPP +LK A IDTY  HR+AM FSL A +D+ VTI DP CT KTFPDYFD L SV++
Sbjct:  281 ERMGARITWGDDFIEAEQGP--------LHGVDMDMNHIPDXAMTIAXVALFAEGPTSIRNIYNWRVKETDRLHAMATDVRKLGVSEEGDLHYITVTPPTQLKHAEIDTYKHHRIAMCFSLVALSDIAVTINDPGCTSKTFPDYFDKLASVSQ 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_RALPJ (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia pickettii (strain 12J) GN=aroA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39
Identity = 88/153 (57.52%), Postives = 105/153 (68.63%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAA--IDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            +MGA V    N + V G  RD  G+ H  AV+++ N +PD AMTLAV ALFADG T + ++ASWRVKET+R+ A+ TELRKLGA VEEG DY  +TPP +    A  IDTYDDHRMAMAFSLAA   VPV I DP C  KTFP+YF     +T
Sbjct:  284 RMGANVMAGGNWIEVRGAERDD-GKLH--AVELDCNHIPDAAMTLAVAALFADGTTTLTNIASWRVKETDRLSAMATELRKLGAEVEEGADYIRVTPPSQWTPPAGGIDTYDDHRMAMAFSLAAFGPVPVRINDPRCVAKTFPEYFTAFGGIT 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_PROMH (3-phosphoshikimate 1-carboxyvinyltransferase OS=Proteus mirabilis (strain HI4320) GN=aroA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39
Identity = 77/152 (50.66%), Postives = 107/152 (70.39%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            EKMGA + W ++ +           R  L+ +D++MN +PD AMT+A  ALFA+G T IR++ +WRVKET+R+ A+ TELRK+GA V+EG DY  + PP++L  A I TY+DHR+AM FSL A ++ P+TI DP CT KTFPDYF+ L S++
Sbjct:  281 EKMGATIRWGDDYIECE--------RGKLKGIDMDMNTIPDAAMTIATTALFAEGETTIRNIYNWRVKETDRLSAMATELRKVGAMVDEGRDYLTVIPPKQLTTAEIKTYNDHRIAMCFSLVALSNTPITILDPGCTAKTFPDYFEKLASIS 424          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_PECCP (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=aroA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39
Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADG-PTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVL 455
            E+MGA V W E+ +           R  L A+D++MN +PD AMT+A  ALFA G  T +R++ +WRVKET+R+ A+  ELRK+GA VEEG DY  ITPP KLK A I TY+DHRMAM FSL A +D PVTI DP CT KTFPDYF+ L
Sbjct:  282 ERMGAIVRWGEDYIECE--------RGELHAIDMDMNHIPDAAMTIATAALFAQGGTTTLRNIYNWRVKETDRLAAMAIELRKVGAEVEEGNDYIRITPPAKLKAAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL 422          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURA4 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=aroA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39
Identity = 84/153 (54.90%), Postives = 110/153 (71.90%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA V+  ++ + V G   D +G+  L  +D++ N +PD AMT+AV ALFA G + +R++ASWRVKET+R+ A+ TELRK+GA VEEG DY V+TPP++L   AAIDTYDDHRMAM FSL +   VPV I DP C  KTFPDYFD   ++ K
Sbjct:  284 QMGANVSMGDDWIEVRGIGHD-HGK--LDPIDMDFNLIPDAAMTIAVAALFASGTSTLRNIASWRVKETDRIAAMATELRKVGAIVEEGADYLVVTPPQRLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAK 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_RALEH (3-phosphoshikimate 1-carboxyvinyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=aroA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.314e-39
Identity = 86/153 (56.21%), Postives = 105/153 (68.63%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAA--IDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            +MGA V   +N + V G  RD  GR H   ++++ N +PD AMTLAV ALFA+G T + ++ASWRVKET+R+ A+ TELRKLGA VEEG DY  +TPP+  +  A  I TYDDHRMAM FSLAA   +PV I DP C  KTFPDYF V   VT
Sbjct:  284 RMGANVMAGDNWIEVRGTERDD-GRLH--GIELDCNHIPDAAMTLAVAALFAEGTTTLTNIASWRVKETDRIAAMATELRKLGAVVEEGADYLRVTPPQPWQTPADGIGTYDDHRMAMCFSLAAFGPLPVRINDPGCVAKTFPDYFSVFAGVT 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHESH (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=aroA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.716e-39
Identity = 80/146 (54.79%), Postives = 102/146 (69.86%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFD 449
            EKMGA + W ++ +   G          L+AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA V+EG DY  ITPP K   A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF+
Sbjct:  282 EKMGADIEWGDDYIISRGST--------LKAVDLDMNHIPDAAMTIATAALFATGTTHIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISITPPTKPHTADIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYFN 419          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEPA (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=aroA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.716e-39
Identity = 78/151 (51.66%), Postives = 106/151 (70.20%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSV 464
            ++MGA++ W ++ +   G          L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA V+EG DY  +TPP +L  AAIDTY DHRMAM FS+ A AD  +TI +P CT KTFPDYF+  +S+
Sbjct:  282 QQMGAEIEWGDDYIISRGAK--------LTAVDLDMNHIPDAAMTIATTALFATGTTHIRNIYNWRIKETDRLAAMATELRKVGAIVDEGHDYISVTPPAELNTAAIDTYSDHRMAMCFSMMAFADCGITINEPECTSKTFPDYFNQFNSL 424          
The following BLAST results are available for this feature:
BLAST of EY693077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
AROA_CUPTR7.703e-4055.843-phosphoshikimate 1-carboxyvinyltransferase OS=Cu... [more]
AROA_BURPP7.703e-4057.533-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]
AROA_AERSA7.703e-4052.293-phosphoshikimate 1-carboxyvinyltransferase OS=Ae... [more]
AROA_RALPJ1.006e-3957.523-phosphoshikimate 1-carboxyvinyltransferase OS=Ra... [more]
AROA_PROMH1.006e-3950.663-phosphoshikimate 1-carboxyvinyltransferase OS=Pr... [more]
AROA_PECCP1.006e-3956.383-phosphoshikimate 1-carboxyvinyltransferase OS=Pe... [more]
AROA_BURA41.006e-3954.903-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]
AROA_RALEH1.314e-3956.213-phosphoshikimate 1-carboxyvinyltransferase OS=Ra... [more]
AROA_SHESH1.716e-3954.793-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEPA1.716e-3951.663-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693077 ID=EY693077; Name=EY693077; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGGAGAAAATGGGTGCCAAAGTTACCTGGACTGAAAACAGT
GTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAACACTTGCG
TGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATGACTCTAG
CTGTAGTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGATGTGGCA
AGTTGGAGAGTGAAAGAAACTGAAAGGATGATTGCTATTTGCACAGAACT
CAGAAAGTTGGGAGCAACAGTTGAAGAAGGACCAGACTACTGTGTGATCA
CCCCACCTGAGAAACTAAAAGTAGCAGCGATTGACACTTATGATGACCAC
CGGATGGCCATGGCATTCTCTCTAGCTGCTTGTGCTGATGTTCCAGTCAC
CATTAAGGATCCTAGTTGCACCAGGAAAACTTTCCCCGACTATTTCGATG
TGCTCGACAGTGTCACGAAGCGTTAAACAGCTCTTCCACATTTCTCATGA
GAGAGAGACTTCTCACCTCCATCAACCGACGAGAACAGCAAAACCACCCT
GTAACTTGCATGGCCTTGTAATTGCCAATAATTATGTGTAAGTTGAGCAT
GTTATTTTTACGAGGACCGAGTGTTTTTTGTTTTACAAATTTANGATGAG
TTTGTTTGGTCCTATCTTGTAAGATTAAATTTGAAATGAACTAATATTAC
TCCAGTGANGTCACTTCGACGTACCAATTAGTCATTGAACACNAGTATAA
AAAAAAAAAAAAGGG
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