EY693077

Overview
NameEY693077
Unique NameEY693077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_CLOB8 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=aroA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 36/121 (29.75%), Postives = 73/121 (60.33%), Query Frame = 3 
Query:   96 LRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLK-VAAIDTYDDHRMAMAFSLAA--CADVPVTIKDPSCTRKTFPDYFD 449
            L++  ++ ++ PD+   +++VA  ++G T I +    R+KE +R+ A+ +EL KLGA + E  +  +I   ++LK    + ++ DHR+AM  ++A+  C +  + +KD  C  K++P ++D
Sbjct:  300 LKSTIIDGSQCPDIIPVVSLVAALSEGTTEIINAGRLRIKECDRLAAVTSELNKLGAKIIEKEEGLIIEGVKELKGNVEVWSHKDHRIAMTMAIASTMCKE-RIILKDYECVSKSYPQFWD 419
The following BLAST results are available for this feature:
BLAST of EY693077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
AROA_CLOB89.813e-1129.753-phosphoshikimate 1-carboxyvinyltransferase OS=Cl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693077 ID=EY693077; Name=EY693077; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGGAGAAAATGGGTGCCAAAGTTACCTGGACTGAAAACAGT
GTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAACACTTGCG
TGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATGACTCTAG
CTGTAGTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGATGTGGCA
AGTTGGAGAGTGAAAGAAACTGAAAGGATGATTGCTATTTGCACAGAACT
CAGAAAGTTGGGAGCAACAGTTGAAGAAGGACCAGACTACTGTGTGATCA
CCCCACCTGAGAAACTAAAAGTAGCAGCGATTGACACTTATGATGACCAC
CGGATGGCCATGGCATTCTCTCTAGCTGCTTGTGCTGATGTTCCAGTCAC
CATTAAGGATCCTAGTTGCACCAGGAAAACTTTCCCCGACTATTTCGATG
TGCTCGACAGTGTCACGAAGCGTTAAACAGCTCTTCCACATTTCTCATGA
GAGAGAGACTTCTCACCTCCATCAACCGACGAGAACAGCAAAACCACCCT
GTAACTTGCATGGCCTTGTAATTGCCAATAATTATGTGTAAGTTGAGCAT
GTTATTTTTACGAGGACCGAGTGTTTTTTGTTTTACAAATTTANGATGAG
TTTGTTTGGTCCTATCTTGTAAGATTAAATTTGAAATGAACTAATATTAC
TCCAGTGANGTCACTTCGACGTACCAATTAGTCATTGAACACNAGTATAA
AAAAAAAAAAAAGGG
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