EY693077

Overview
NameEY693077
Unique NameEY693077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURS3 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia sp. (strain 383) GN=aroA PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.825e-42
Identity = 87/153 (56.86%), Postives = 112/153 (73.20%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA VT  ++ + V G   D +G+  L  +D++ N +PD AMT+AV ALFA+G + +R++ASWRVKET+R+ A+ TELRK+GA +EEGPDY V+TPPEKL   AAIDTYDDHRMAM FSL +   VPV I DP C  KTFPDYFD   ++ K
Sbjct:  284 QMGANVTMGDDWIDVRGIGHD-HGK--LEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGAIIEEGPDYLVVTPPEKLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAK 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_ALISL (3-phosphoshikimate 1-carboxyvinyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=aroA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.302e-42
Identity = 84/150 (56.00%), Postives = 105/150 (70.00%), Query Frame = 3
Query:   18 MGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            MGA++ W ++ V           +  L A+D++ N +PD AMT+A  ALFA G T+IR+V +WRVKET+R+ A+ TELRK+GA VEEG DY  ITPP  L+ A IDTYDDHRMAM FSL A +D PVTI DP CT KTFPDYFD L  ++
Sbjct:  285 MGAEIEWGDDYVIAH--------KGELNAIDMDFNHIPDAAMTIATTALFAKGTTSIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYITITPPAMLRHATIDTYDDHRMAMCFSLVALSDTPVTINDPGCTSKTFPDYFDKLKELS 426          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_VIBFM (3-phosphoshikimate 1-carboxyvinyltransferase OS=Vibrio fischeri (strain MJ11) GN=aroA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.230e-42
Identity = 83/150 (55.33%), Postives = 105/150 (70.00%), Query Frame = 3
Query:   18 MGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            MG ++ W ++ V           +  L A+D++ N +PD AMT+A  ALFA G T+IR+V +WRVKET+R+ A+ TELRK+GA VEEG DY  ITPP  L+ A+IDTYDDHRMAM FSL A +D PVTI DP CT KTFPDYFD L  ++
Sbjct:  284 MGTEIEWGDDYVIAR--------KGELNAIDMDFNHIPDAAMTIATAALFAKGTTSIRNVYNWRVKETDRLAAMATELRKVGAVVEEGEDYITITPPASLQHASIDTYDDHRMAMCFSLVALSDTPVTINDPGCTSKTFPDYFDKLKELS 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_VIBF1 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=aroA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.230e-42
Identity = 83/150 (55.33%), Postives = 105/150 (70.00%), Query Frame = 3
Query:   18 MGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            MG ++ W ++ V           +  L A+D++ N +PD AMT+A  ALFA G T+IR+V +WRVKET+R+ A+ TELRK+GA VEEG DY  ITPP  L+ A+IDTYDDHRMAM FSL A +D PVTI DP CT KTFPDYFD L  ++
Sbjct:  284 MGTEIEWGDDYVIAR--------KGELNAIDMDFNHIPDAAMTIATAALFAKGTTSIRNVYNWRVKETDRLAAMATELRKVGAVVEEGEDYITITPPASLQHASIDTYDDHRMAMCFSLVALSDTPVTINDPGCTSKTFPDYFDKLKELS 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_ENTS8 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=aroA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.230e-42
Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            EKMGA +TW ++ ++ T        R  L A+D++MN +PD AMT+A  ALFA G T +R++ +WRVKET+R+ A+ TELRK+GATVEEG D+  +TPP +L+ A I TY+DHRMAM FSL A +D PVTI DP CT KTFP+YF  L  ++
Sbjct:  282 EKMGAHITWGDDFISCT--------RGELNAIDMDMNHIPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLAAMATELRKVGATVEEGHDFITVTPPAQLQFADIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPNYFAQLARIS 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_PASPI (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pasteurella piscicida GN=aroA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.404e-41
Identity = 84/153 (54.90%), Postives = 106/153 (69.28%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            E MGA++ W E+ +            + L A+D++ N +PD AMT+A  ALFA G T+IR+V +WRVKET+R+ A+ TELRKLGA VEEG DY  IT P +LK  AIDTYDDHRMAM FSL A +D  VTI DP CT KTFPDYF  L+ +++
Sbjct:  282 EAMGAEIEWGEDYIIAR--------HRQLNAIDMDFNHIPDAAMTIATAALFAPGTTSIRNVYNWRVKETDRLHAMATELRKLGAEVEEGDDYITITSPTQLKHVAIDTYDDHRMAMCFSLVALSDTAVTINDPKCTSKTFPDYFTKLEQLSR 426          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_PSYIN (3-phosphoshikimate 1-carboxyvinyltransferase OS=Psychromonas ingrahamii (strain 37) GN=aroA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            E MGAK+ W ++ +  +        +  L+A+D++MN +PD AMT+AV ALFA G T IR+V +WRVKET+R+ A+ TELRK+GATV EG D+  +T PEKL  A IDTYDDHRMAM FSL A  +  VTI DP CT KTFPDYF+ L SV+
Sbjct:  284 EAMGAKIEWGDDYIKAS--------KGELKAIDMDMNHIPDAAMTIAVAALFATGTTKIRNVYNWRVKETDRLYAMATELRKVGATVVEGHDFIEVTAPEKLIHAEIDTYDDHRMAMCFSLVALGNTQVTINDPKCTSKTFPDYFEKLASVS 427          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_PHOLL (3-phosphoshikimate 1-carboxyvinyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=aroA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTKR 473
            EKMGAK+ W ++ V           R  L  +D++MN++PD AMT+A  ALFA G T IR++ +WRVKET+R+ A+ TELRK+GA VEEG DY  ITPP +L  A I TY+DHRMAM FSL A +D PVTI DP CT KTFPDYF+ L+ +++R
Sbjct:  281 EKMGAKIRWGDDFVECE--------RGTLTGIDMDMNEIPDAAMTIATTALFAAGETVIRNIYNWRVKETDRLHAMATELRKVGAEVEEGVDYIRITPPPRLLPAEIGTYNDHRMAMCFSLVALSDTPVTILDPGCTAKTFPDYFNQLERLSQR 426          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_ECO27 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=aroA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 83/153 (54.25%), Postives = 108/153 (70.59%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            EKMGA + W ++ ++          R  L A+D++MN +PD AMT+A  ALFA G T +R++ +WRVKET+R+ A+ TELRK+GA VEEG D+  ITPPEKLK A I TY+DHRMAM FSL A +D  VTI DP CT KTFPDYF+ L  +++
Sbjct:  281 EKMGATICWGDDYISCM--------RGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDFIRITPPEKLKFAEIATYNDHRMAMCFSLVALSDTAVTILDPKCTAKTFPDYFEQLARISQ 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURCJ (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=aroA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 87/153 (56.86%), Postives = 111/153 (72.55%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA VT  ++ + V G   D +G+  L  +D++ N +PD AMT+AV ALFA+G + +R++ASWRVKET+R+ A+ TELRK+GA VEEGPDY V+TPP KL   AAIDTYDDHRMAM FSL +   VPV I DP C  KTFPDYFD   ++ K
Sbjct:  284 QMGANVTMGDDWIDVRGIGHD-HGK--LEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGAIVEEGPDYLVVTPPAKLTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAK 433          
The following BLAST results are available for this feature:
BLAST of EY693077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
AROA_BURS34.825e-4256.863-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]
AROA_ALISL6.302e-4256.003-phosphoshikimate 1-carboxyvinyltransferase OS=Al... [more]
AROA_VIBFM8.230e-4255.333-phosphoshikimate 1-carboxyvinyltransferase OS=Vi... [more]
AROA_VIBF18.230e-4255.333-phosphoshikimate 1-carboxyvinyltransferase OS=Vi... [more]
AROA_ENTS88.230e-4253.953-phosphoshikimate 1-carboxyvinyltransferase OS=En... [more]
AROA_PASPI1.404e-4154.903-phosphoshikimate 1-carboxyvinyltransferase OS=Pa... [more]
AROA_PSYIN1.834e-4155.923-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
AROA_PHOLL1.834e-4155.193-phosphoshikimate 1-carboxyvinyltransferase OS=Ph... [more]
AROA_ECO271.834e-4154.253-phosphoshikimate 1-carboxyvinyltransferase OS=Es... [more]
AROA_BURCJ1.834e-4156.863-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693077 ID=EY693077; Name=EY693077; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGGAGAAAATGGGTGCCAAAGTTACCTGGACTGAAAACAGT
GTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAACACTTGCG
TGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATGACTCTAG
CTGTAGTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGATGTGGCA
AGTTGGAGAGTGAAAGAAACTGAAAGGATGATTGCTATTTGCACAGAACT
CAGAAAGTTGGGAGCAACAGTTGAAGAAGGACCAGACTACTGTGTGATCA
CCCCACCTGAGAAACTAAAAGTAGCAGCGATTGACACTTATGATGACCAC
CGGATGGCCATGGCATTCTCTCTAGCTGCTTGTGCTGATGTTCCAGTCAC
CATTAAGGATCCTAGTTGCACCAGGAAAACTTTCCCCGACTATTTCGATG
TGCTCGACAGTGTCACGAAGCGTTAAACAGCTCTTCCACATTTCTCATGA
GAGAGAGACTTCTCACCTCCATCAACCGACGAGAACAGCAAAACCACCCT
GTAACTTGCATGGCCTTGTAATTGCCAATAATTATGTGTAAGTTGAGCAT
GTTATTTTTACGAGGACCGAGTGTTTTTTGTTTTACAAATTTANGATGAG
TTTGTTTGGTCCTATCTTGTAAGATTAAATTTGAAATGAACTAATATTAC
TCCAGTGANGTCACTTCGACGTACCAATTAGTCATTGAACACNAGTATAA
AAAAAAAAAAAAGGG
back to top