EY693077

Overview
NameEY693077
Unique NameEY693077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_VIBSL (3-phosphoshikimate 1-carboxyvinyltransferase OS=Vibrio splendidus (strain LGP32) GN=aroA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.128e-41
Identity = 84/148 (56.76%), Postives = 104/148 (70.27%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVL 455
            EKMGA++ W ++ V              L+ +D++ N +PD AMT+A  ALFA G TAIR+V +WRVKET+R+ A+ TELRK+GA VEEG DY ++ P  +L  AAIDTYDDHRMAM FSL A +D PVTI DP CT KTFPDYFD L
Sbjct:  282 EKMGAEIEWGDDYVISRCG--------ELKGIDMDYNHIPDAAMTIATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGAEVEEGEDYIIVNPVAELTHAAIDTYDDHRMAMCFSLVALSDTPVTINDPGCTSKTFPDYFDKL 421          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHESR (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sp. (strain MR-7) GN=aroA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.335e-41
Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  L  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGAP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTTIRNIYNWRIKETDRLAAMATELRKVGALVEEGHDYIQITPPAVLNTAEIDTYNDHRMAMCFSMMAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEON (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella oneidensis GN=aroA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.335e-41
Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  L  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGAP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVLNTAQIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_VIBHB (3-phosphoshikimate 1-carboxyvinyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=aroA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.967e-41
Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVT 467
            EKMGA + W ++ V          G+  L+ +D++ N +PD AMT+A  ALFA+G T+IR+V +WRVKET+R+ A+ TELRK+GA VEEG DY ++ P  +L  AAIDTYDDHRMAM FSL A +D PVTI DP CT KTFPDYFD L +++
Sbjct:  282 EKMGADIEWGDDYVI------SRVGQ--LKGIDMDYNHIPDAAMTIATTALFAEGTTSIRNVYNWRVKETDRLSAMATELRKVGAEVEEGEDYIIVKPVPQLTHAAIDTYDDHRMAMCFSLVALSDKPVTINDPKCTSKTFPDYFDKLKALS 425          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHESA (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sp. (strain ANA-3) GN=aroA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.967e-41
Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  L  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGAP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTTIRNIYNWRIKETDRLAAMATELRKVGALVEEGHDYIQITPPVVLNTAEIDTYNDHRMAMCFSMMAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHESW (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sp. (strain W3-18-1) GN=aroA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.100e-41
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGSP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHEPC (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=aroA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.100e-41
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  +  A IDTY+DHRMAM FS+ A AD  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGSP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVINTAEIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYF 418          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURVG (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=aroA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 85/153 (55.56%), Postives = 110/153 (71.90%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA V+  ++ + V G   D +G+  L  +D++ N +PD AMT+AV ALFA G + +R++ASWRVKET+R+ A+ TELRKLGA VEEGPDY V+TPP++L   A IDTYDDHRMAM FSL +   VPV I DP C  KTFPDYFD   ++ K
Sbjct:  284 QMGANVSMGDDWIEVRGIGHD-HGK--LDPIDMDFNLIPDAAMTIAVAALFASGTSTLRNIASWRVKETDRIAAMATELRKLGAVVEEGPDYLVVTPPQRLTPNATIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAK 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_BURM1 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=aroA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.552e-40
Identity = 86/153 (56.21%), Postives = 110/153 (71.90%), Query Frame = 3
Query:   15 KMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKV-AAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK 470
            +MGA VT  ++ + V G   D +G+  L  +D++ N +PD AMT+AV ALFA+G + +R++ASWRVKET+R+ A+ TELRK+GATVEEG DY V+TPP  L   AAIDTYDDHRMAM FSL +   VPV I DP C  KTFPDYFD   ++ K
Sbjct:  284 QMGANVTMGDDWIEVRGIGHD-HGK--LEPIDMDFNLIPDAAMTIAVAALFANGTSTLRNIASWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAALTPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVGKTFPDYFDRFAALAK 433          
BLAST of EY693077 vs. ExPASy Swiss-Prot
Match: AROA_SHESM (3-phosphoshikimate 1-carboxyvinyltransferase OS=Shewanella sp. (strain MR-4) GN=aroA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.027e-40
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   12 EKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYF 446
            EKMGA + W ++ +   G P        L AVD++MN +PD AMT+A  ALFA G T IR++ +WR+KET+R+ A+ TELRK+GA VEEG DY  ITPP  L  A IDTY+DHRMAM FS+ A A+  +TI DP CT KTFPDYF
Sbjct:  282 EKMGADIEWGDDYIIARGAP--------LTAVDLDMNHIPDAAMTIATAALFAKGTTTIRNIYNWRIKETDRLAAMATELRKVGALVEEGHDYIQITPPAVLNTAEIDTYNDHRMAMCFSMMAFANCGITINDPDCTSKTFPDYF 418          
The following BLAST results are available for this feature:
BLAST of EY693077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
AROA_VIBSL3.128e-4156.763-phosphoshikimate 1-carboxyvinyltransferase OS=Vi... [more]
AROA_SHESR5.335e-4156.553-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEON5.335e-4156.553-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_VIBHB6.967e-4155.263-phosphoshikimate 1-carboxyvinyltransferase OS=Vi... [more]
AROA_SHESA6.967e-4156.553-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHESW9.100e-4155.863-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_SHEPC9.100e-4155.863-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]
AROA_BURVG1.188e-4055.563-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]
AROA_BURM11.552e-4056.213-phosphoshikimate 1-carboxyvinyltransferase OS=Bu... [more]
AROA_SHESM2.027e-4055.863-phosphoshikimate 1-carboxyvinyltransferase OS=Sh... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693077 ID=EY693077; Name=EY693077; organism=Citrus sinensis; type=EST; length=765bp
CCACGCGTCCGGAGAAAATGGGTGCCAAAGTTACCTGGACTGAAAACAGT
GTAACTGTCACCGGACCACCACGAGATCCTTATGGAAGGAAACACTTGCG
TGCTGTAGATGTCAACATGAACAAGATGCCAGATGTTGCCATGACTCTAG
CTGTAGTTGCACTATTTGCTGATGGTCCCACTGCCATTAGGGATGTGGCA
AGTTGGAGAGTGAAAGAAACTGAAAGGATGATTGCTATTTGCACAGAACT
CAGAAAGTTGGGAGCAACAGTTGAAGAAGGACCAGACTACTGTGTGATCA
CCCCACCTGAGAAACTAAAAGTAGCAGCGATTGACACTTATGATGACCAC
CGGATGGCCATGGCATTCTCTCTAGCTGCTTGTGCTGATGTTCCAGTCAC
CATTAAGGATCCTAGTTGCACCAGGAAAACTTTCCCCGACTATTTCGATG
TGCTCGACAGTGTCACGAAGCGTTAAACAGCTCTTCCACATTTCTCATGA
GAGAGAGACTTCTCACCTCCATCAACCGACGAGAACAGCAAAACCACCCT
GTAACTTGCATGGCCTTGTAATTGCCAATAATTATGTGTAAGTTGAGCAT
GTTATTTTTACGAGGACCGAGTGTTTTTTGTTTTACAAATTTANGATGAG
TTTGTTTGGTCCTATCTTGTAAGATTAAATTTGAAATGAACTAATATTAC
TCCAGTGANGTCACTTCGACGTACCAATTAGTCATTGAACACNAGTATAA
AAAAAAAAAAAAGGG
back to top