EY693025

Overview
NameEY693025
Unique NameEY693025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 3.126e-52
Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1
Query:   34 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQ 576
            GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C     P+WC  G  + +TATN C          GGWCNPP+ HFD+++P +  I  Y+AG++PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G V +VS+KG  TGW  ++RNWG NWQ
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQ 209          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 4.923e-52
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  106 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSTL 585
            YG+L    +   +A LS  LFN G SCG+C E++CVN  +WCL G+  ++VTAT+FC          GGWCN P++H +LS   F  IA+ RA ++P+ Y+RV CGRRGG+RF+++G S+F  VLI+NVG  G+V  V +KG  T W PM+RNWGQNW S+L
Sbjct:   53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSL 214          

HSP 2 Score: 46.9802 bits (110), Expect = 4.923e-52
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  588 LXGQSLSFXVTTSDGRTVTSYXXAPASWSFGRTLLGAQF 704
            L GQSLSF VT   G+T+ SY  AP  W FG T  G QF
Sbjct:  216 LIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.423e-51
Identity = 90/183 (49.18%), Postives = 113/183 (61.75%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV--NDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQ 576
            W+   ATFY              YGNLY Q YG N AALST LFN+G SCG CY I C     P WC  G  I VT TN+           GGWCN  + +FD+SQP +++I  Y AG+VP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS TGW  M+RNWG NWQ
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQ 194          

HSP 2 Score: 39.2762 bits (90), Expect = 1.423e-51
Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  588 LXGQSLSFXVTTSDGRTVTSYXXAPASWSFGRT 686
            L GQ+LSF VT++ G+T+      PA WSFG+T
Sbjct:  199 LAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQT 231          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.313e-50
Identity = 88/183 (48.09%), Postives = 118/183 (64.48%), Query Frame = 1
Query:   31 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQS 579
            G W  A ATFY              YGNL++ GYG +TAALST LFN+G  CG C++I C   P      + +VTATN C          GGWCNPP+ HFD+++P F  +A +RAG++PVAY+RVPC R GG+RF   G+SY+ L+ + NVGGAGD+ ++++KGSRT W  MS NWG ++Q+
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQA 217          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 2.012e-50
Identity = 89/184 (48.37%), Postives = 114/184 (61.96%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSTL 585
            W +ARA +Y               YG+L   GYG  TAALSTALFN+G SCG+CYEI C  +P+ CL G+I +TAT+ C            WC  P +HFDLS P+F  IAQ +A +VPV Y+RVPC + GG++F + G+     +L  NVGGAGD+ AVS KGS+T W  MSR WGQNW + +
Sbjct:   45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPG-------SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNV 221          

HSP 2 Score: 39.6614 bits (91), Expect = 2.012e-50
Identity = 21/45 (46.67%), Postives = 24/45 (53.33%), Query Frame = 3
Query:  561 GAKLAKHTYLXGQSLSFXVTTSDGRTVTSYXXAPASWSFGRTLLG 695
            G     +  L GQS+S  VTTSDG T       PASW FG+T  G
Sbjct:  214 GQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 7.570e-50
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK-GSRTGWQPMSRNWGQNWQS 579
            W  A ATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+++CV     C  G+  I VTATN C          GG  WCNPP+ HFDLS+P F  +A +RAG+VPV Y+RVPC R GG+RF + G+ Y+ L  + NV GAGDV  + +K G   GW  MS NWG ++Q+
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQA 221          

HSP 2 Score: 36.1946 bits (82), Expect = 7.570e-50
Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 3
Query:  561 GAKLAKHTYLXGQSLSFXVTT-SDGRTVTSYXXAPASWSFGRT 686
            GA       L GQ+LSF VT+ + G+T+ +    PASW FG T
Sbjct:  216 GASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLT 258          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.563e-46
Identity = 92/188 (48.94%), Postives = 117/188 (62.23%), Query Frame = 1
Query:   34 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQST 582
            GWI A AT+Y              Y N Y  G+G +TAALS  LF +G SCG CY+++C    DPKWCL G  + VTATNFC           GWCN P+ HFD+S P F  IA+    G+VPV Y+RV C RRGG+RFT+ G   FN+V+I+NVGG G V +V+++GS+   W  M+RNWG NWQS+
Sbjct:   26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNN-----NGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSS 208          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.362e-39
Identity = 76/153 (49.67%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  130 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQ 576
            Y T TAALST LF +G  CG CYE++CV  P WC PG+  +++T TN C          GGWCNPP+ HFD++ P F  +AQ  AG+VPV Y+RVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K S  G  W   + NWG  +Q
Sbjct:   85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQ 236          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.706e-37
Identity = 77/193 (39.90%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   16 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQS 579
            H N G    G W++  ATFY               G   + GYG  TAA+S ALF+NG  CG+CYE+K  +        T++VTATN                    +HFDL+ P F  IA+ + GVVPV+Y++V C R+GGI++TI G+  +N+V++ NVGGAGDV  +++KG+ R  W P+ R+WGQ W++
Sbjct:   71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKT 247          

HSP 2 Score: 35.039 bits (79), Expect = 5.706e-37
Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 3
Query:  588 LXGQSLSFXVTTSDGRTVTSYXXAPASWSFGRT 686
            L G+SL+F V T D R  TS+  AP  W++  T
Sbjct:  251 LTGESLTFRVMTGDHRKATSWRVAPRDWTYDNT 283          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.122e-17
Identity = 61/195 (31.28%), Postives = 88/195 (45.13%), Query Frame = 1
Query:   28 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSR--TGWQPMSRNWGQNWQ 576
            G GW +  AT+Y              Y +   Q  + +  AA   +LF NG  CGSCY+IKC  + + C    + V  T+ C          GG C     HFD+S   F  +A          AGV+ + YKRVPC     + F ++  S  Y+  +L+    G GD+ AV I  +R   GW+ M ++WG  W+
Sbjct:   42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC---------PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWR 226          
The following BLAST results are available for this feature:
BLAST of EY693025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
EXP25_ORYSJ3.126e-5250.00Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ARATH4.923e-5250.00Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXP20_ORYSJ1.423e-5149.18Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH1.313e-5048.09Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP21_ARATH2.012e-5048.37Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP30_ORYSJ7.570e-5048.39Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP12_ARATH2.563e-4648.94Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP17_ORYSJ1.362e-3949.67Expansin-A17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ORYSJ5.706e-3739.90Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB5_ORYSJ1.122e-1731.28Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-A03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693025 ID=EY693025; Name=EY693025; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCG
TGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTT
GTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCC
TTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGA
GATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGG
TCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCA
GGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCTCAGCCTGT
GTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGTAGCTTACA
AGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAATCAATGGC
CATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGTGCTGGTGA
TGTTCATGCTGTTTCAATCAAAGGGTCTAGAACTGGCTGGCAGCCCATGT
CAAGAAACTGGGGGCAAAACTGGCAAAGCACACTTATCTCNATGGCCAAA
GCCTGTCATTTAANGTCACCACAAGCGATGGCCGCACTGTGACTTCCTAC
NATGNTGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTTACTCGGTGCTCA
ATTCCGCTAGAGCCACCAGACCATTAGAGATTGGGTTTTACACCCTTTTT
AGCTAATATTTCGTGACTAAGTAGTATATTTTAGTATGAAATTTAGCATA
CTAGGGTATTATATATATATTATATATTAAGTAGCTATGTGGCTAGTTTT
TGCTTCCAGGTCAAAAATGAAAAAAGGGCTTATTTTAAAGGGCTATTTTT
TTCATTTGAATGATTTTAGGGGGGCGGGG
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