EY693025

Overview
NameEY693025
Unique NameEY693025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 55/201 (27.36%), Postives = 80/201 (39.80%), Query Frame = 1
Query:   25 GGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPC---GRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG---WQPMSRNWGQNWQ 576
            G   W NA+AT+Y               G   +    +   T+  +  L+  G  CGSCY ++C  +P  C     T+ +T  N+                  Q HFDLS   F  +A+        RAG++ V + RVPC   G + G          +  VL+    G GDV  V +K +  G   W PM  +WG  W+
Sbjct:   44 GAAAWGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPA-CSGNAQTVAITDMNYFPL--------------SQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWR 229          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.776e-11
Identity = 52/199 (26.13%), Postives = 84/199 (42.21%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG-GIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSRTG------WQPMSRNWGQNWQ 576
            W+ A+AT+Y               G  N     + + T+  +  LF +G  CG+CY+I+C N+P     P T+++T  N+                  + HFDLS   F  +A+         AG++ + ++RVPC  RG  + F +   S   +  VL+      G V  + +  S         W PM R+WG  W+
Sbjct:   31 WLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPV--------------ARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWR 215          

HSP 2 Score: 21.1718 bits (43), Expect = 1.776e-11
Identity = 7/22 (31.82%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  606 SFXVTTSDGRTVTSYXXAPASW 671
            S  + +  G+TV ++   PA+W
Sbjct:  227 SLRMVSESGQTVIAHQVIPANW 248          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 54/207 (26.09%), Postives = 83/207 (40.10%), Query Frame = 1
Query:    1 PRVRVHANGGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTINGHSYFN----LVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQ 576
            P   +  N  G W+ ARAT+Y               G  N+    Y   TA  +  +F +G  CGSCYE++C   P+    P T+ +T  N+                    HFDLS   F  +A+          G++ V ++RV C    G +   +     N     VL+  V   GD+  + I+   +  W+PM  +WG  W+
Sbjct:   31 PGPNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPI--------------APYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWR 223          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 54/207 (26.09%), Postives = 83/207 (40.10%), Query Frame = 1
Query:    1 PRVRVHANGGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTINGHSYFN----LVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQ 576
            P   +  N  G W+ ARAT+Y               G  N+    Y   TA  +  +F +G  CGSCYE++C   P+    P T+ +T  N+                    HFDLS   F  +A+          G++ V ++RV C    G +   +     N     VL+  V   GD+  + I+   +  W+PM  +WG  W+
Sbjct:   31 PGPNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYEPI--------------APYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWR 223          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11
Identity = 57/191 (29.84%), Postives = 79/191 (41.36%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRA-------GVVPVAYKRVPCGRRG-GIRFTIN-GHSYFNLVLITNV-GGAGDVHAVSIK-GSRTGWQPMSRNWGQNW 573
            W  A AT+Y              YG+L           ++S  LF +G  CG+CY++KC+ D   C    + V  T+ C          GG C   + HFDLS   F  +A   A       G + V Y+R  C   G  I F +N G + F L L+     G GD+ ++ IK  +   W  M   WG  W
Sbjct:   48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC---------PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATW 228          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 53/202 (26.24%), Postives = 81/202 (40.10%), Query Frame = 1
Query:   31 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYG--TNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPC---GRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-------WQPMSRNWGQNWQ 576
            G W  ARAT+Y               G  ++  Y   + T+  +  LF +G  CGSCY+I+C  D        T+++T  N+                    HFDLS   F  +A+         +G++ + + RVPC   G + G       +  +  VL+    G GDV  V +  S+T        W PM  +WG  W+
Sbjct:   53 GPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPF--------------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWR 240          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 55/202 (27.23%), Postives = 86/202 (42.57%), Query Frame = 1
Query:   37 WINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYKRVPCGRRG-GIRFTINGHSYFN--LVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQSTLISMAKA 603
            W  A +T+Y              YGN  +Q  +    +A   +LF +G  CG+CY++KC +    C    + V  T+ C             C     HFDLS   F  +A      Q R  G + + YK+V C   G  + F ++  S  N   VL+  V G G++  + +K +     W  MS++WG  W+  + S  +A
Sbjct:   47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSKNPVTVVITDECPG-----------CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRA 236          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 53/205 (25.85%), Postives = 92/205 (44.88%), Query Frame = 1
Query:    1 PRVRVHANGGGGWINARATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTING--HSYFNLVLITNVGGAGDVHAVSI--KGSRTGWQPMSRNWGQNWQ 576
            P   + A  G  W++A+AT+Y                Y ++    + +  A  +  +F +GL CGSC+EIKC + P  C    ++V  T+              +      HFDL+   F  +A+        +AG++ + ++RV C     + F +    +  +  +L+  V G GD+ AV I  KGS T ++P+  +WG  W+
Sbjct:   37 PGKNITAKYGSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDM------------NYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDT-YEPLKHSWGAIWR 227          
BLAST of EY693025 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11
Identity = 55/206 (26.70%), Postives = 93/206 (45.15%), Query Frame = 1
Query:    1 PRVRVHANGGGGWINARATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRGGIRFTIN---GHSYFNLVLITNVGGAGDVHAVSI--KGSRTGWQPMSRNWGQNWQ 576
            P   + A  G  W++A+AT+Y                Y ++    + +  A  +  +F +GL CGSC+EIKC + P  C    ++V  T+              +      HFDL+   F  +A+        +AG++ + ++RV C     + F +    G +Y  L L+  V G GD+ AV +  KGS T ++P+  +WG  W+
Sbjct:   38 PGKNITATYGKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECSGKPVVVHITDM------------NYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDT-YEPLKHSWGAIWR 228          
The following BLAST results are available for this feature:
BLAST of EY693025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
EXPB8_ORYSJ1.202e-1127.36Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB2_ORYSJ1.776e-1126.13Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB9_MAIZE2.677e-1126.09Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2[more]
EXPB1_MAIZE2.677e-1126.09Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2[more]
EXB17_ORYSJ3.497e-1129.84Expansin-B17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB4_ORYSJ4.567e-1126.24Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB2_ARATH7.790e-1127.23Putative expansin-B2 OS=Arabidopsis thaliana GN=EX... [more]
EXB11_MAIZE7.790e-1125.85Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1[more]
EXB10_MAIZE7.790e-1126.70Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-A03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693025 ID=EY693025; Name=EY693025; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCG
TGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTT
GTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCC
TTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGA
GATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGG
TCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCA
GGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCTCAGCCTGT
GTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGTAGCTTACA
AGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGGTTCACAATCAATGGC
CATTCCTACTTCAACCTAGTGTTGATCACCAACGTTGGTGGTGCTGGTGA
TGTTCATGCTGTTTCAATCAAAGGGTCTAGAACTGGCTGGCAGCCCATGT
CAAGAAACTGGGGGCAAAACTGGCAAAGCACACTTATCTCNATGGCCAAA
GCCTGTCATTTAANGTCACCACAAGCGATGGCCGCACTGTGACTTCCTAC
NATGNTGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTTACTCGGTGCTCA
ATTCCGCTAGAGCCACCAGACCATTAGAGATTGGGTTTTACACCCTTTTT
AGCTAATATTTCGTGACTAAGTAGTATATTTTAGTATGAAATTTAGCATA
CTAGGGTATTATATATATATTATATATTAAGTAGCTATGTGGCTAGTTTT
TGCTTCCAGGTCAAAAATGAAAAAAGGGCTTATTTTAAAGGGCTATTTTT
TTCATTTGAATGATTTTAGGGGGGCGGGG
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