EY693007

Overview
NameEY693007
Unique NameEY693007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY693007 vs. ExPASy Swiss-Prot
Match: METK_IDILO (S-adenosylmethionine synthetase OS=Idiomarina loihiensis GN=metK PE=3 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 8.074e-11
Identity = 34/86 (39.53%), Postives = 42/86 (48.84%), Query Frame = 3 
Query:  309 TCRSIGIVSDDGGFVADHCLGLVDIVRHRPHIAQGVDGDFTERPEDIGAGDQGLMFAYATAETPEFLPFRRGLAIKLGAHVTEVMN 566
            T + IG    D GF    C  L  I +    I QGVD      PE+ GAGDQGLMF YA+ ET   +P     A ++    +EV N
Sbjct:   72 TVKDIGYRHSDMGFDGASCAVLNAIGKQSGDINQGVD---RANPEEQGAGDQGLMFGYASNETSVLMPAPITYAHRVMQRQSEVRN 154

HSP 2 Score: 38.1206 bits (87), Expect = 8.074e-11
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 
Query:  157 QISDAELDACLDQDAESKVACETCAITYMVVVFG 258
            QISDA LDA L +D +++VACET   T MV+V G
Sbjct:   22 QISDAVLDAILAKDPKARVACETYVKTGMVLVGG 55
The following BLAST results are available for this feature:
BLAST of EY693007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
METK_IDILO8.074e-1139.53S-adenosylmethionine synthetase OS=Idiomarina loih... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693007 ID=EY693007; Name=EY693007; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGACCGCTTTGCTATTGAGGTCTGGTCTTAAGGCTGAATCT
GAGATCTGTGCCGAAACACTTGTGTGCCACACCTTGACAAGACGGAGACC
TCTCTATTGGCCTCTGCAATCTGTGAGCGGGGGTCACCCCGACAAGTTGA
GTCTACCAAATCTCTGATGCGGAGCTTGATGCCTGCCTTGATCAAGATGC
TGAGAGCAAGGTTGCCTGCGAGACATGCGCCATTACCTACATGGTCGTGG
TCTTTGGATAGGATTACCATCAATGCCGATGTAGACATATGATAAGATTG
GTGGCTACACTTGCCGCTCTATTGGAATTGTTTCTGATGATGGGGGTTTT
GTTGCCGATCACTGCCTAGGCCTGGTTGATATTGTGCGACACAGACCTCA
TATCGCCCAGGGTGTTGATGGTGACTTTACTGAGCGCCCTGAAGACATTG
GTGCTGGAGACCAGGGGCTTATGTTTGCTTATGCTACTGCTGAGACCCCT
GAGTTCCTGCCTTTTCGGCGCGGCCTTGCCATCAAACTTGGAGCTCACGT
CACTGAGGTCATGAATATATCACCTGCTCTTGGCTAAGGCTCCTGCGCGA
CCCAAGTCACTGGTGAGGCTACAATGCCAAGGGTGGCATATACCTGTTCG
TATTCTTACGGCCTATTTCATGCAGCATGCAGAGACTGTCCTAATGATGA
AATGCTGCTGACTCATGGATCACGTATAATGCTGCATCTCCGAAGCTTCG
TTGTTGGAAACCNTTCTCCACCTTATCCTCCCGTCNTTTTGCATTCGACG
GGCTCTTGGTGCCCTGGCTCCTTGACTTAAATCTCATCACCTTTGGGGGC
CGGG
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