EY693001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.298e-67 Identity = 123/165 (74.55%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECISIH+GQAG+Q+GNA WELYCLEHGIQPD +MPSDKTVG DD+FNTFFSETGAG HVPRAVFVDLEP+V+DE R+G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D+ LDRI KLAD CT LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISIHVGQAGVQMGNAVWELYCLEHGIQPDAKMPSDKTVGVSDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.776e-67 Identity = 121/159 (76.10%), Postives = 134/159 (84.28%), Query Frame = 3 Query: 117 IHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 +H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT GGGDD+FNTFFSETGAG HVPRA+FVDLEPTVIDE RTG YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D+ LDR KLAD CT LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 159
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.044e-61 Identity = 110/165 (66.67%), Postives = 133/165 (80.61%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590 MRE ISIH+GQAG Q+GNACWELYCLEHGI+PDG++ +KT DD F+TFFSETG+G +VPR+++VDLEP VID+ RTGTYR LFHPEQLI+GKE AANN+ARGHYT+GKE+ D LDRI ++ADNCT LQGFLVF++ GGGT S G + YGKK+ Sbjct: 1 MREVISIHVGQAGTQIGNACWELYCLEHGIEPDGRLSPEKTTKPLDDGFSTFFSETGSGKYVPRSIYVDLEPNVIDQVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKELIDHVLDRIRRVADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.627e-60 Identity = 109/165 (66.06%), Postives = 133/165 (80.61%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRE ISIH+GQAG+Q+GNACWELYCLEHGIQPDG MP+ T G ++F TFFS+TG+G +VPR++FVDLEPTV+DE RTGTY++LFHPEQ+I+GKE AANN+ARGHYT+GKE+ D LDRI +LADNC+ LQGF VF++ GGGT S L YGKK+ Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKS 163
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.699e-59 Identity = 110/165 (66.67%), Postives = 127/165 (76.97%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG G HVPRAV VDLEPTV+DE R GTYRQLFHPEQLI+GKE AANN+ARGHYT+GKE DL LDRI KL D C+ LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.699e-59 Identity = 110/165 (66.67%), Postives = 127/165 (76.97%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG G HVPRAV VDLEPTV+DE R GTYRQLFHPEQLI+GKE AANN+ARGHYT+GKE DL LDRI KL D C+ LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA8_HUMAN (Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.699e-59 Identity = 109/165 (66.06%), Postives = 127/165 (76.97%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG G HVPRAV +DLEPTV+DE R GTYRQLFHPEQLI+GKE AANN+ARGHYT+GKE DL LDRI KL D C+ LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.101e-58 Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWEL+CLEHGIQ DG + + DD+F TFFSETG G HVPRAV VDLEPTV+DE R GTYR LFHPEQLI+GKE AANN+ARGHYT+GKE DL LDRI KL D C+ LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKIHDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRHLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.031e-56 Identity = 108/165 (65.45%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590 MRE +SIHIGQAGIQVGNACWELYCLEHGI PDG + D DDAF+TFFSET G VPR VF+DLE VIDE + G Y+ L+HPEQLI G E AANN+ARGHYTIGKEI ++ LDRI KL +NC+ LQGFL+FN+ GGGT S LG L YGKK+ Sbjct: 1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.917e-56 Identity = 99/150 (66.00%), Postives = 120/150 (80.00%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG 548 MRE ISIH+GQAG Q+GNACWELYCLEHGIQP+G M + D F+TFFSETG G +VPR+++VDLEP VID+ RTG YR LFHPEQLI+GKE A+NN+ARGHYT+GKE+ D D+I ++ADNC+ LQGFLVF++ GGGT S G Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFG 150 The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bpback to top |