EY693001

Overview
NameEY693001
Unique NameEY693001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.451e-76
Identity = 139/165 (84.24%), Postives = 144/165 (87.27%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPR +F+DLEPTV+DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DL LDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.451e-76
Identity = 139/165 (84.24%), Postives = 144/165 (87.27%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPR +F+DLEPTV+DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DL LDRI KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREVISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCIFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.921e-75
Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQ+P DKT G  DDAF+TFFS+TGAG HVPRA+FVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGFLVFNA GGGT S LG      +   YGKK+
Sbjct:    1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQVPGDKTAGHHDDAFSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVEYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.427e-75
Identity = 137/165 (83.03%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPR VF+DLEPTV DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLAD CT LQGFLVFN+ GGGT S LG L        YGKK+
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVDDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.427e-75
Identity = 136/165 (82.42%), Postives = 144/165 (87.27%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPRAV+VDLEPTV DE RTGTYRQL+HPEQ+ISGKE AANN+ARGHYTIGKEI DL LDRI KLADNCT LQGFLVF+A GGGT S LG L        YG+K+
Sbjct:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.096e-74
Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGA  HVPR VF+DLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLAD CT LQGFLVFN+ GGGT S LG L        YGKK+
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAEKHVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.432e-74
Identity = 134/165 (81.21%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPR VF+DLEPTV+DE RTGTYR LFHPEQLISGKE AANNFARGHYTIGKEI DL LDRI KLADNCT LQGFL+FNA GGGT S LG      +   YGKK+
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_NEOCA (Tubulin alpha chain OS=Neospora caninum GN=TUBA PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.432e-74
Identity = 134/165 (81.21%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRE ISIH+GQAGIQ+GNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPR VF+DLEPTV+DE RTGTYR LFHPEQLISGKE AANNFARGHYTIGKEI DL LDRI KLADNCT LQGFL+FNA GGGT S LG      +   YGKK+
Sbjct:    1 MREVISIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRCVFLDLEPTVVDEVRTGTYRHLFHPEQLISGKEDAANNFARGHYTIGKEIVDLSLDRIRKLADNCTGLQGFLMFNAVGGGTGSGLGCLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.441e-74
Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQ GIQVGNACW+L+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPRAVF+DLEPTV DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKEI DLCLDRI KLADNCT LQGF+ F++ GGGT S LG L        YGKK+
Sbjct:    1 MREVISIHIGQGGIQVGNACWDLFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVCDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFIGFHSVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.106e-74
Identity = 137/165 (83.03%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD TVG   DAFNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCLDR+ KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
TBA1_VOLCA4.451e-7684.24Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN... [more]
TBA1_CHLRE4.451e-7684.24Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii... [more]
TBA3_MAIZE4.921e-7582.42Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV... [more]
TBA_OXYGR6.427e-7583.03Tubulin alpha chain OS=Oxytricha granulifera PE=3 ... [more]
TBA2_PELFA6.427e-7582.42Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA1_STYLE1.096e-7482.42Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S... [more]
TBA_TOXGO1.432e-7481.21Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1[more]
TBA_NEOCA1.432e-7481.21Tubulin alpha chain OS=Neospora caninum GN=TUBA PE... [more]
TBA_EUPOC5.441e-7481.82Tubulin alpha chain OS=Euplotes octocarinatus PE=3... [more]
TBA3_ARATH7.106e-7483.03Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGAATTTCACTAGAAGGCGTCTTAATAAACGCCTTCGTTTA
GATTCAATTACTTTACGTCGCCGATTTTTCTTCTCTTAATCTGCGAAAAT
GAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAA
ATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGC
CAAATGCCCAGTGATAAGACAGTCGGAGGCGGCGACGATGCTTTCAACAC
CTTTTTCAGTGAAACTGGCGCAGGGAACCACGTGCCTCGTGCTGTCTTTG
TTGATCTTGAGCCCACTGTCATTGATGAAGAGAGGACCGGAACTTACCGC
CAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAATACGCTGCCAA
CAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGCTGATCTCT
GCCTTGACCGCATCACGAAGCTGGCTGATAACTGCACTGTTCTCCAGGGA
TTCCTTGTTTTCAATGCTGCTGGTGGAGGAACTGCCTCTGATCTGGGTCT
CTTCTTCTGGACAGCTGTCTGTTGCTATGGAAAGAAAGCAAGTTGGCTAC
CTGACACCCAGCTCTCAGACTCCACTTCTGTGGTGAGCCTACAGAGTGTC
CTCTCACCCACTCGCTGTGAAGCATCTGATGAGGTCGTCTCCCCGACATG
ACGCCATGATAACATCGCAGGCCTCCTTGGATGGACGTCCTACTTACTAG
CCCAATAACTTGGTCCCAGTCATTCCTAATGACTGCCTACTGAAGATGAG
GCGCGTTAAAGGGTTGGACTGATTCCA
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