EY693001

Overview
NameEY693001
Unique NameEY693001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_CRIGR (Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
[Close]
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.212e-73
Identity = 133/165 (80.61%), Postives = 143/165 (86.67%), Query Frame = 3 
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
TBA1B_PIG1.212e-7380.61Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=... [more]
TBA1B_PANTR1.212e-7380.61Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1... [more]
TBA1B_MOUSE1.212e-7380.61Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b P... [more]
TBA1B_MERUN1.212e-7380.61Tubulin alpha-1B chain OS=Meriones unguiculatus GN... [more]
TBA1B_MACFA1.212e-7380.61Tubulin alpha-1B chain OS=Macaca fascicularis GN=T... [more]
TBA1B_HUMAN1.212e-7380.61Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B P... [more]
TBA1B_CRIGR1.212e-7380.61Tubulin alpha-1B chain OS=Cricetulus griseus GN=TU... [more]
TBA1B_BOVIN1.212e-7380.61Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2[more]
TBA1A_RAT1.212e-7380.61Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tub... [more]
TBA1A_PANTR1.212e-7380.61Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGAATTTCACTAGAAGGCGTCTTAATAAACGCCTTCGTTTA
GATTCAATTACTTTACGTCGCCGATTTTTCTTCTCTTAATCTGCGAAAAT
GAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAA
ATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGC
CAAATGCCCAGTGATAAGACAGTCGGAGGCGGCGACGATGCTTTCAACAC
CTTTTTCAGTGAAACTGGCGCAGGGAACCACGTGCCTCGTGCTGTCTTTG
TTGATCTTGAGCCCACTGTCATTGATGAAGAGAGGACCGGAACTTACCGC
CAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAATACGCTGCCAA
CAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGCTGATCTCT
GCCTTGACCGCATCACGAAGCTGGCTGATAACTGCACTGTTCTCCAGGGA
TTCCTTGTTTTCAATGCTGCTGGTGGAGGAACTGCCTCTGATCTGGGTCT
CTTCTTCTGGACAGCTGTCTGTTGCTATGGAAAGAAAGCAAGTTGGCTAC
CTGACACCCAGCTCTCAGACTCCACTTCTGTGGTGAGCCTACAGAGTGTC
CTCTCACCCACTCGCTGTGAAGCATCTGATGAGGTCGTCTCCCCGACATG
ACGCCATGATAACATCGCAGGCCTCCTTGGATGGACGTCCTACTTACTAG
CCCAATAACTTGGTCCCAGTCATTCCTAATGACTGCCTACTGAAGATGAG
GCGCGTTAAAGGGTTGGACTGATTCCA
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