EY693001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.779e-16 Identity = 44/76 (57.89%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 375 ISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKASWL 599 + GKE AANN+ARGHYT+GKE+ ++C DRI KLAD C LQGFLVF++ GGGT S G L YG K S L Sbjct: 1 LRGKEDAANNYARGHYTVGKELIEVCADRIRKLADQCEGLQGFLVFHSVGGGTGSGFGSLLLQRLALEYGGKKSKL 76
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.355e-15 Identity = 52/166 (31.33%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSET-----GAGNHVP---------RAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLF 554 M + + + +GQ G Q+G W+L EH + G D+A ++FF G G + RAV +D+E V++E G R +F +QLI+ + NN+A GH G D L++ K A++C LQ F + ++ GGGT S LG F Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTF 158
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.722e-15 Identity = 52/166 (31.33%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSET-----GAGNHVP---------RAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLF 554 M + + + +GQ G Q+G W+L EH + G DDA ++FF G G + RAV +D+E V++E G R +F +QLI+ + NN+A GH G + L+++ K A+ C LQ F + ++ GGGT S LG F Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTF 158
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.761e-15 Identity = 56/160 (35.00%), Postives = 75/160 (46.88%), Query Frame = 3 Query: 105 ECISIHIGQAGIQVGNACWELYCLEHGIQPDG--QMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQ--LISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVC 572 E I++ GQ G VG W EH I DG Q+P T DD FF E PRA+ +D EP+VI + T+R F P + S A N++A G Y IG D L++I K D+ +GF + ++ GGT S LG A+C Sbjct: 4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTER--DDDTKPFFRENSRNKFTPRAIMMDSEPSVIADVE-NTFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALC 159
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.844e-14 Identity = 48/150 (32.00%), Postives = 73/150 (48.67%), Query Frame = 3 Query: 105 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP-SDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQL-ISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG 548 E I+I +GQ G VG W EHGI DG +D +D N FF + +VPRA+ +DLEP + + ++ ++ LF+P +S + A N Y G + D +D I + D+ +GF + ++ GGT S LG Sbjct: 4 EIITIQVGQCGNHVGKYFWNQLLKEHGIDKDGYSKYNDDLTHIREDDTNPFFKQITNNRYVPRAIMIDLEPAAVTDVQS-SFNDLFNPRNTWVSSEGLGAGNSWSTGYDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSVAGGTGSGLG 152
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 111 ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVID-EERTGTYRQLFHPEQLISGKE--YAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG 548 +++H+GQ G Q+ A W+ EHGI GQ + + +D + F + ++VPRAV VDLEP VI+ ++ + LF+ + + A NN+A G Y G+E+ + +D I + A+N L G L ++ GGT S G Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTG 152
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13 Identity = 55/151 (36.42%), Postives = 71/151 (47.02%), Query Frame = 3 Query: 105 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQM--PSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQL-ISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG 548 E ISI +GQ G QVG W EHGI DGQ P D V DD N FF + PRA+ DLEP+ I + + + F+ + IS +E A N Y G E D ++ I K D +GF + ++ GGT S LG Sbjct: 4 EIISIQVGQCGNQVGKQFWGQLAREHGIGVDGQSLHPEDANVVREDDT-NVFFRQNDHNRFTPRALLYDLEPSAIGDVQ-NCFPGFFNERNVWISKEELGAGNTWSIGYDYGLEKQDEFMNMIDKEIDATGNFEGFQLIHSVAGGTGSGLG 152
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.035e-12 Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 333 RTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG 548 R+G + Q+F P+ + G+ A NN+A+GHYT G E+ D LD + K A++C LQGF + ++ GGGT S +G Sbjct: 3 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 74
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBD_XENTR (Tubulin delta chain OS=Xenopus tropicalis GN=tubd1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.838e-11 Identity = 45/158 (28.48%), Postives = 75/158 (47.47%), Query Frame = 3 Query: 111 ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNT-----FFSETGAGNHVPRAVFVDLEPTVIDEE-----RTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLF 554 +++ +GQ G QVG +++ C + +P + +D + T FF E G+ V RAV VD+EP V+ + R+G ++ + S K+ NN+A G+ G + D+ +D + K + C L GF + GGT S +G F Sbjct: 4 VTVQLGQCGNQVGYEFFDILCSDLHSKPGHSTKRE------NDYYQTVCKEQFFHEEECGDLVTRAVLVDMEPKVVSKTLSMAGRSGKWK--YDISSQFSQKQGCGNNWANGYCVHGPKHQDIVMDLVRKQVEKCDRLGGFFTIMSMAGGTGSGMGTF 153 The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bpback to top |