EY693001

Overview
NameEY693001
Unique NameEY693001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_EUPVA (Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.286e-72
Identity = 133/165 (80.61%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE IS+HIGQ GIQVGNACWEL+CLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAG HVPRAV VDLEPTV DE RTGTYRQLFHPEQ+ISGKE AANNFARGHYTIGKEI DL LDRI KLADNCT LQGF+ F++ GGGT S LG L        YGKK+
Sbjct:    1 MREVISVHIGQGGIQVGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVLVDLEPTVCDEIRTGTYRQLFHPEQIISGKEDAANNFARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFIGFHSVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.286e-72
Identity = 133/165 (80.61%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD +VG   DAFNTFFSETG+G HVPRA+FVDLEPTVIDE RTG+YRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCLDR+ KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.286e-72
Identity = 133/165 (80.61%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD +VG   DAFNTFFSETG+G HVPRA+FVDLEPTVIDE RTG+YRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCLDR+ KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.985e-72
Identity = 132/165 (80.00%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG MPSDKT+G  DDAFNTFFSETGAG HVPRAVF+DLEPTV+DE RTGTYRQLFHPEQLISGKE AANN+ARGHYTIGKEI DLCLDRI KLADNCT LQGFLV++A GGGT S LG      +   YGKK+
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEIRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.985e-72
Identity = 130/165 (78.79%), Postives = 142/165 (86.06%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDG MPSDKTVGGGDD+F+TFFSETGAG HVPRAVFVDLEPTV+DE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D+ LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.899e-72
Identity = 125/147 (85.03%), Postives = 137/147 (93.20%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTAS 539
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEPTV+DE RTGTYRQLFHPEQLI+GKE AA+N+ARGHYTIGKEI DL LDRI KLAD CT LQGFL+F++ GGGT S
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGS 147          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.899e-72
Identity = 127/165 (76.97%), Postives = 143/165 (86.67%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRAVFVDLEP+V+DE R+GTYRQLFHPEQLI+GKE AANN+ARGHYT+GKE+ DL LDRI KLAD CT LQGFL+F++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.092e-72
Identity = 129/165 (78.18%), Postives = 142/165 (86.06%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAG HVPRA+FVDLEP+VIDE RTGTYRQLFHPEQLISGKE AANN+ARGHYTIGKEI D  LDR+ KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFVDLEPSVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLDRMRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.651e-72
Identity = 131/165 (79.39%), Postives = 140/165 (84.85%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIH+GQ GIQ+GNACWELYCLEHGIQPDG MPSDK +G  DDAFNTFFSETGAG HVPRAVF+DLEP+V+DE RTGTYRQLFHPEQLISGKE AANN+ARGHYTIGKEI DLCLDRI KLADNCT LQGFL F+A GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHLGQGGIQIGNACWELYCLEHGIQPDGSMPSDKAIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPSVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLAFHAVGGGTGSGLGRLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 6.651e-72
Identity = 134/165 (81.21%), Postives = 138/165 (83.64%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGI  DG MPSD TVG   DAFNTFFSETGAG HVPRA+FVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCLDR+ KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGINQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
TBA_EUPVA2.286e-7280.61Tubulin alpha chain OS=Euplotes vannus PE=3 SV=1[more]
TBA6_MAIZE2.286e-7280.61Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV... [more]
TBA3_ELEIN2.286e-7280.61Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 ... [more]
TBA_TRYCR2.985e-7280.00Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1[more]
TBA2_DROME2.985e-7278.79Tubulin alpha-2 chain OS=Drosophila melanogaster G... [more]
TBA3E_HUMAN3.899e-7285.03Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E P... [more]
TBA1_APLCA3.899e-7276.97Tubulin alpha-1 chain OS=Aplysia californica PE=2 ... [more]
TBA_NOTVI5.092e-7278.18Tubulin alpha chain OS=Notophthalmus viridescens P... [more]
TBA_EUGGR6.651e-7279.39Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE... [more]
TBA1_HORVU6.651e-7281.21Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGAATTTCACTAGAAGGCGTCTTAATAAACGCCTTCGTTTA
GATTCAATTACTTTACGTCGCCGATTTTTCTTCTCTTAATCTGCGAAAAT
GAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAA
ATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGC
CAAATGCCCAGTGATAAGACAGTCGGAGGCGGCGACGATGCTTTCAACAC
CTTTTTCAGTGAAACTGGCGCAGGGAACCACGTGCCTCGTGCTGTCTTTG
TTGATCTTGAGCCCACTGTCATTGATGAAGAGAGGACCGGAACTTACCGC
CAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAATACGCTGCCAA
CAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGCTGATCTCT
GCCTTGACCGCATCACGAAGCTGGCTGATAACTGCACTGTTCTCCAGGGA
TTCCTTGTTTTCAATGCTGCTGGTGGAGGAACTGCCTCTGATCTGGGTCT
CTTCTTCTGGACAGCTGTCTGTTGCTATGGAAAGAAAGCAAGTTGGCTAC
CTGACACCCAGCTCTCAGACTCCACTTCTGTGGTGAGCCTACAGAGTGTC
CTCTCACCCACTCGCTGTGAAGCATCTGATGAGGTCGTCTCCCCGACATG
ACGCCATGATAACATCGCAGGCCTCCTTGGATGGACGTCCTACTTACTAG
CCCAATAACTTGGTCCCAGTCATTCCTAATGACTGCCTACTGAAGATGAG
GCGCGTTAAAGGGTTGGACTGATTCCA
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