EY693001

Overview
NameEY693001
Unique NameEY693001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 8.686e-72
Identity = 127/165 (76.97%), Postives = 142/165 (86.06%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+G GDD+FNTFFSETG+G HVPRAV+VDLEPTV+DE RTGTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI KLAD CT LQGFL+F++ GGGT S    L        YGKK+
Sbjct:    1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGTGDDSFNTFFSETGSGKHVPRAVYVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.134e-71
Identity = 130/165 (78.79%), Postives = 139/165 (84.24%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQMPSDK     DDAFNTFFSETGAG HVPR VFVDLEPTV+DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKE+ D+CLDRI KLADNCT LQGFL+F+A GGGT S  G      +   YGKK+
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSDKASRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.482e-71
Identity = 129/165 (78.18%), Postives = 140/165 (84.85%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECISIH+GQAG Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFF ETGAG HVPRAVFVDLEPTVIDE RTG YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D+ LDRI KLADNC  LQGFL+F++ GGGT S    L        YGKK+
Sbjct:    1 MRECISIHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.935e-71
Identity = 132/165 (80.00%), Postives = 140/165 (84.85%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+ DG MPSD +VG   DAFNTFFSETG+G HVPRA+FVDLEPTVIDE RTG+YRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCLDR+ KLADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEHDGTMPSDSSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.301e-71
Identity = 129/165 (78.18%), Postives = 140/165 (84.85%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590
            MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFFSETGAG HVPRAVFVDLEPTVIDE R GTYRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D  LDRI KLAD CT LQGFLVF++ GGGT S    L        YGKK+
Sbjct:    1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.301e-71
Identity = 133/165 (80.61%), Postives = 138/165 (83.64%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGNACWELYCLEHGIQ DG MPSD TVG   DAFNTFFSETGAG HVPRA+FVDLEPTVIDE RTG YRQLFHPEQLISGKE AANNFARGHYT+GKEI DLCL R+ +LADNCT LQGFLVFNA GGGT S LG L        YGKK+
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIQQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLGRVRQLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.301e-71
Identity = 128/165 (77.58%), Postives = 141/165 (85.45%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAG QVGNACWELYCLEHGI PDGQMPSDK+VGGGDDAFNTFFSET +G HVPRA+++DLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYT+GKEI DLCLDR+ KLAD C+ LQGFLVF++ GGGT S  G L        YGKK+
Sbjct:    1 MREIISIHIGQAGAQVGNACWELYCLEHGINPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIYLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.301e-71
Identity = 127/165 (76.97%), Postives = 142/165 (86.06%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE +SIHIGQAG QVGNACWELYCLEHGI+PDGQMPSDK+VGGGDDAFNTFFSET +G HVPRA+F+DLEPTVIDE RTGTYRQLFHPEQLI+GKE AANN+ARGHYT+GKE+ DLCLDR+ KLAD C+ LQGFLVF++ GGGT S  G L        YGKK+
Sbjct:    1 MREILSIHIGQAGAQVGNACWELYCLEHGIKPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.638e-70
Identity = 128/165 (77.58%), Postives = 138/165 (83.64%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590
            MRE ISIH+GQAGIQVGNACWEL+CLEHGIQPDGQMP D+     DDAFNTFFSETGAG HVPR VFVDLEPTV+DE RTGTYRQLFHPEQLISGKE AANNFARGHYTIGKE+ D+CLDRI KLADNCT LQGFL+F+A GGGT S  G      +   YGKK+
Sbjct:    1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPPDQAGRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLMLERLSVDYGKKS 165          
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.638e-70
Identity = 130/165 (78.79%), Postives = 139/165 (84.24%), Query Frame = 3
Query:   99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590
            MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD TVG   DAFNTFFSET +G HVPRAVF+DLEPTVIDE RTGTYRQLFHPEQLISGKE AANNFARGHYT+G+EI D CL+R+ KLADNCT LQGFLVFNA GGGT S LG L        +GKK+
Sbjct:    1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKS 165          
The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
TBA_LEPDS8.686e-7276.97Tubulin alpha chain OS=Lepidoglyphus destructor PE... [more]
TBA_PLAFK1.134e-7178.79Tubulin alpha chain OS=Plasmodium falciparum (isol... [more]
TBA3_HOMAM1.482e-7178.18Tubulin alpha-3 chain OS=Homarus americanus PE=2 S... [more]
TBA5_MAIZE1.935e-7180.00Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV... [more]
TBA_XENTR3.301e-7178.18Tubulin alpha chain OS=Xenopus tropicalis GN=tuba ... [more]
TBA_AVESA3.301e-7180.61Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 S... [more]
TBAN_PHYPO3.301e-7177.58Tubulin alpha-1B chain OS=Physarum polycephalum GN... [more]
TBAE_PHYPO3.301e-7176.97Tubulin alpha-2B chain OS=Physarum polycephalum GN... [more]
TBA_PLAYO1.638e-7077.58Tubulin alpha chain OS=Plasmodium yoelii yoelii GN... [more]
TBA1_ARATH1.638e-7078.79Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=T... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGAATTTCACTAGAAGGCGTCTTAATAAACGCCTTCGTTTA
GATTCAATTACTTTACGTCGCCGATTTTTCTTCTCTTAATCTGCGAAAAT
GAGAGAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAA
ATGCCTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGC
CAAATGCCCAGTGATAAGACAGTCGGAGGCGGCGACGATGCTTTCAACAC
CTTTTTCAGTGAAACTGGCGCAGGGAACCACGTGCCTCGTGCTGTCTTTG
TTGATCTTGAGCCCACTGTCATTGATGAAGAGAGGACCGGAACTTACCGC
CAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAATACGCTGCCAA
CAACTTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGCTGATCTCT
GCCTTGACCGCATCACGAAGCTGGCTGATAACTGCACTGTTCTCCAGGGA
TTCCTTGTTTTCAATGCTGCTGGTGGAGGAACTGCCTCTGATCTGGGTCT
CTTCTTCTGGACAGCTGTCTGTTGCTATGGAAAGAAAGCAAGTTGGCTAC
CTGACACCCAGCTCTCAGACTCCACTTCTGTGGTGAGCCTACAGAGTGTC
CTCTCACCCACTCGCTGTGAAGCATCTGATGAGGTCGTCTCCCCGACATG
ACGCCATGATAACATCGCAGGCCTCCTTGGATGGACGTCCTACTTACTAG
CCCAATAACTTGGTCCCAGTCATTCCTAATGACTGCCTACTGAAGATGAG
GCGCGTTAAAGGGTTGGACTGATTCCA
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