EY693001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.811e-69 Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRAVFVDLEPTVIDE R G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D LDRI KL+D CT LQGFLVF++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.811e-69 Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRAVFVDLEPTVIDE R G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D LDRI KL+D CT LQGFLVF++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.811e-69 Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRAVFVDLEPTVIDE R G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D LDRI KL+D CT LQGFLVF++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.811e-69 Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRAVFVDLEPTVIDE R G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D LDRI KL+D CT LQGFLVF++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 1.811e-69 Identity = 126/165 (76.36%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRAVFVDLEPTVIDE R G YRQLFHPEQLI+GKE AANN+ARGHYTIGKEI D LDRI KL+D CT LQGFLVF++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.035e-69 Identity = 127/165 (76.97%), Postives = 140/165 (84.85%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRE ISIHIGQAG+Q+GNACWELYCLEHGIQPDGQMPSDK++GG DD+F+TFFSETG+G HVPRAV +DLEPTVIDE RTGTYR LFHPEQLI+GKE AANN+ARGHYTIGKEI DL LDRI +LADNCT LQGFLVF++ GGGT S L YGKKA Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGCDDSFSTFFSETGSGRHVPRAVMIDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKA 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.882e-69 Identity = 124/165 (75.15%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECISIH+GQAG+Q+GNACWELYCLEHGIQP GQMPSDK VGG DD+FNTFFSETG+G HVPRAVFVDLEPTV+DE RTG YRQLFHPEQLI+GKE AANN+ARGHYTIGKE DL LDR+ KL+D CT LQGFL+F++ GGGT S L YGKK+ Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPSGQMPSDKAVGGKDDSFNTFFSETGSGKHVPRAVFVDLEPTVVDEIRTGLYRQLFHPEQLITGKEDAANNYARGHYTIGKEHIDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.882e-69 Identity = 129/165 (78.18%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLG-LFFWTAVCCYGKKA 590 MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD ++G DAFNTFFSETGAG HVPRA+FVDLEPTVIDE +TG YRQLFHPEQLIS KE AANNFARGHYT+G+EI D CLDRI KLADNCT LQGFLVFNA GGGT S LG L YG+K+ Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSLGVARDAFNTFFSETGAGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREIVDPCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.416e-68 Identity = 123/165 (74.55%), Postives = 135/165 (81.82%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDL-GLFFWTAVCCYGKKA 590 MRECIS+H+GQAG+Q+GN CWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFF ETGAG HVPRA+FVDLEPTVIDE R G YRQLFHPEQLI+GKE ANN+ARGHYTIGKEI D LDRI KLAD CT LQGFL F++ GGGT S L YGKK+ Sbjct: 1 MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHSFGGGTGSGFTSLLMERLSGDYGKKS 165
BLAST of EY693001 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.938e-68 Identity = 122/165 (73.94%), Postives = 138/165 (83.64%), Query Frame = 3 Query: 99 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGNHVPRAVFVDLEPTVIDEERTGTYRQLFHPEQLISGKEYAANNFARGHYTIGKEIADLCLDRITKLADNCTVLQGFLVFNAAGGGTASDLGLFFWTAVCC-YGKKA 590 MRECISIH+GQAG+Q+GN+CWELYCLEHGIQPDGQMPSDKTVG +D+FNTFF+ETG+G HVPRAVFVDLEP+VIDE R+G YRQLFHPEQLISGKE AANN+ARGHYTIGKE D+ LDRI KLAD CT LQGFL+F + GGGT S + YGKK+ Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKS 165 The following BLAST results are available for this feature:
BLAST of EY693001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693001 ID=EY693001; Name=EY693001; organism=Citrus sinensis; type=EST; length=827bpback to top |