EY692949

Overview
NameEY692949
Unique NameEY692949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROMA (Protein grpE OS=Prochlorococcus marinus GN=grpE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  311 EEAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEK--------------IDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFDHCFTSNMREDSQKLM 805
            EE  TS   E L + +E +AS +   + + E + +S  D+               +D E ++  L +E    R++ +RI+ADFDNFRKR  +++  L        +  +L V+DNFERA+ QI  + E    I+ +YQ++YKQLV++L  LGV P+   G  FD      +  +  +LM
Sbjct:    3 EEVSTSN-QEDLVADQEVIASEESDLSPKEEKVSESTIDDDDSLNDAELQSNKQTLDNEARLEQLEKEHETLRSQYVRIAADFDNFRKRQSRDQDDLKLQLTCNTLSEILPVVDNFERARQQINPEGEEALTIHRNYQNLYKQLVDVLKKLGVAPMRVVGQSFDPTLHEALLREPSELM 180          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM4 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9211) GN=grpE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  311 EEAPTS---FIMETLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQKL 802
            E  PTS    +    +  +EA A  D T +       K    + +D E ++  L  E     ++ +RI+ADFDNFRKR  +++  L    Q   +  +L V+DNF+RA+ Q+  + E  + ++ SYQ +YKQLV++L  LGV P+   G  FD     + +RE S +L
Sbjct:   24 EAKPTSDEPSLSNVAEGSQEAGAETDVTSSDA-----KDSSSQALDNEARLEQLEREHETLNSQYMRIAADFDNFRKRQSRDQDDLRLQLQCNTLSSILPVVDNFDRARQQLNPEGEEAQALHKSYQGLYKQLVDVLKQLGVAPMRVVGQTFDPSLHEAVLREPSDEL 186          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM0 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 49/156 (31.41%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  338 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQK 799
            E   S + +   ND+  + + E +  +  ++   + + ++  L +E    + + +RISADFDNFRKR  +++  L      + +  +L ++DNFERA+ Q+K ++E  + ++ SYQ +YKQLVE+L   GV P+   G  FD +   + +RE S++
Sbjct:   24 EDKSSMQNSTTENDELSSQKTEEINTEELKNTISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEE 179          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM3 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9303) GN=grpE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  362 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            A  ++D+ + +   A L   E     LE++  +L EE    R++ +RI+ADFDNFRKR  +++  L        +  +L V+DNFERA+ Q++ Q E  + ++ SYQ +YKQLVE+L  LGV  +   G  FD
Sbjct:   27 ASMNSDEGQPSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRLQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFD 159          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM2 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.773e-17
Identity = 49/156 (31.41%), Postives = 91/156 (58.33%), Query Frame = 2
Query:  338 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQK 799
            E + S + +   ND+  + + EA+  +  ++   + + ++  L +E    + + +RISADFDNFRKR  +++  L      + +  +L ++DNFERA+ Q++ ++E  + ++ SYQ +YKQLVE+L   GV P+   G  FD +   + +RE S++
Sbjct:   24 EDISSEQNSTNENDELTSQKKEAINTEELKNTISNNDARLKQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQIVSKTLTAILPIVDNFERARQQLQPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEE 179          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJA (Protein grpE OS=Synechococcus sp. (strain JA-3-3Ab) GN=grpE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 51/161 (31.68%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  335 METLQSYKEALASNDDTKAAEIEALLKSFEDEKI------------DLERKVVNLSEELSAERARI-------LRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            M T  +Y E      D +A   + +L+  E E              DL   +  L +EL   R ++       +R+ ADF+N+R+RT++E+       + + +  +L V+D+FERA+ Q+K++T+ E +++NSYQS+Y+ LVE L  +GV  +++ G PFD
Sbjct:    1 MPTEDAYPELQEEEIDVEAELEKLILEDREAEASTSSGEASAEASQDLSETLKQLQQELEITRQQLKEKEESYIRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDREREVHNSYQSVYRLLVECLKKMGVSRMKSVGQPFD 161          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM9 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 50/156 (32.05%), Postives = 87/156 (55.77%), Query Frame = 2
Query:  338 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQK 799
            E   S  E    ND+    + E +  +  ++   + + ++  L +E    + + +RISADFDNFRKR  +++  L      + +  +L ++DNFERA+ Q+K ++E  + ++ SYQ +YKQLVE+L   GV P+   G  FD +   + +RE S++
Sbjct:   24 EDNSSAAEKTIENDELSPQKTEEINTEELKNTISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEE 179          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJB (Protein grpE OS=Synechococcus sp. GN=grpE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.509e-16
Identity = 46/134 (34.33%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  440 LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFDHCFTSNMREDSQKLMRCDY-EDSAGVQ 838
            L+ ++  + ++L  +    LR+ ADF+N+R+RT++E+       + + +  +L V+D+FERA+ Q+K++T+ E +++NSYQS+Y+ LVE L  +GV  +++ G PFD     N+ E   +    DY ED   V+
Sbjct:   55 LQHELEVVRQQLKEKEDAYLRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDRERELHNSYQSVYRLLVECLKKMGVSRMKSVGQPFD----PNLHEAIARQPSPDYPEDVVAVE 184          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROMM (Protein grpE OS=Prochlorococcus marinus (strain MIT 9313) GN=grpE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16
Identity = 48/133 (36.09%), Postives = 78/133 (58.65%), Query Frame = 2
Query:  362 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            A  ++D+ +++   A L   E     LE++  +L EE    R++ +RI+ADFDNFRKR  +++  L        +  +L V+DNFERA+ Q++ Q E  + ++ SYQ +YKQLV++L  +GV  +   G  FD
Sbjct:   27 ASINSDEGQSSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFD 159          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_PROM5 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9515) GN=grpE PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.361e-16
Identity = 48/152 (31.58%), Postives = 87/152 (57.24%), Query Frame = 2
Query:  347 QSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQK 799
            Q+ ++    +D+ +  + E L  +  +    LE+    L +E    +++ +RI+ADFDNFRKR  +++  L      + +  +L ++DNFERA+ Q+K + +  + ++ SYQ +YKQLVE+L   GV P+   G  FD +   + +RE S++
Sbjct:   32 QTNEDKKLPDDNNEKIDAEDLKNTITNNDARLEQ----LEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKIQLVSKALTAILPIVDNFERARQQLKPEGDEAQTLHRSYQGLYKQLVEVLKQQGVAPMRVVGQQFDPNLHEAVLREPSEE 179          
The following BLAST results are available for this feature:
BLAST of EY692949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GRPE_PROMA1.782e-1732.40Protein grpE OS=Prochlorococcus marinus GN=grpE PE... [more]
GRPE_PROM42.328e-1733.33Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM05.186e-1731.41Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM36.773e-1737.59Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM26.773e-1731.41Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_SYNJA1.155e-1631.68Protein grpE OS=Synechococcus sp. (strain JA-3-3Ab... [more]
GRPE_PROM91.155e-1632.05Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_SYNJB1.509e-1634.33Protein grpE OS=Synechococcus sp. GN=grpE PE=3 SV=... [more]
GRPE_PROMM2.574e-1636.09Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM53.361e-1631.58Protein grpE OS=Prochlorococcus marinus (strain MI... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-B07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692949 ID=EY692949; Name=EY692949; organism=Citrus sinensis; type=EST; length=885bp
TTGCCGACCCACGCGTCCGCGTGCAGCCCCTATTTCCTTAAAATCTCCGA
AACCCATCTGTATTTCCTTCAGACAACGTCTAATAAGCACCAGCAGACTT
TATCATCGGTCAAATTCTCTCCGGTTCGTAAGTGTTCAGTCTCTCCGGTT
CGTAAAGTTCTCTCCTTTAGCTTCAACTGGAGAAACTGAAACCCAAGAGG
AAATTCAGGAACCCCAAATTGAGGAATCTTCCGATGGTGCTGTTGGCATT
GAAGATGGCACTAGTGACGATGATAGCTCTGGAGCTACTAGTGATGACAC
CTCAGATGCTGAGGAAGCACCTACTTCATTCATTATGGAAACACTCCAAT
CATACAAAGAAGCTTTGGCCAGTAATGACGATACCAAAGCTGCTGAAATA
GAGGCTTTATTAAAATCCTTTGAAGATGAGAAAATTGATCTTGAGAGGAA
AGTTGTTAACTTGTCTGAAGAATTGTCAGCTGAGAGGGCTCGTATTCTTA
GGATCAGTGCTGACTTTGACAATTTTCGTAAGAGAACGGAGAAGGAACGC
CTTTCACTGGTAACAAATGCTCAAGGAGAAGTCATGGAGAGATTGTTGCA
AGTTTTGGATAATTTTGAGAGAGCTAAAACTCAAATTAAGGTGCAGACCG
AGGGAGAGGAGAAAATAAACAACAGCTATCAGAGCATATATAAGCAATTA
GTGGAAATCCTANGATCACTTGGTGTTTGTCCTGTGGAGAACGGTGGGAA
TCCTTTTGATCATTGCTTCACGAGCAATATGCGCGAGGATTCACAGAAAT
TGATGAGGTGTGATTATGAAGATTCCGCAGGGGTTCAACTGGCGAAGGCT
CTACCTCCTCGATGGAAAGGATCGGCTGGTCAGGG
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