EY692949

Overview
NameEY692949
Unique NameEY692949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_BACP2 (Protein grpE OS=Bacillus pumilus (strain SAFR-032) GN=grpE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  422 EDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +DE+   + K+  L + L  +  +ILR+ ADF+N+++R   E  ++       V+  LL  LDNFERA   I    E  + +    Q +Y+QLVE L + GV P+E  G  FD
Sbjct:   30 QDEQSAFQEKIDELQQLLDEKENKILRVQADFENYKRRARTEVETVQKYRSQHVVSDLLPALDNFERA-LGIDPDNEQAKSLLEGMQMVYRQLVEALKNEGVEPIEAVGKEFD 141          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_GEOTN (Protein grpE OS=Geobacillus thermodenitrificans (strain NG80-2) GN=grpE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 2
Query:  362 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEE--KINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMRED 790
            A  + D  +   +EA      +E    + +V  L E+L+    R LR+ ADF+NFR+R  +E  +        +   LL VLDNFERA   +K++TE E+   I    + +Y+ L++ L   GV  +E  G PFD H   + M+ D
Sbjct:   51 ASTTADPAEQTSVEA------EELAKAKAQVAELEEKLAEMEKRYLRLYADFENFRRRARQEMEAAEKYRAQSLASDLLPVLDNFERA---LKIETENEQAKSILQGVEMVYRSLLDALRKEGVEVIEAVGKPFDPHLHQAVMQTD 187          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_CLOPS (Protein grpE OS=Clostridium perfringens (strain SM101 / Type A) GN=grpE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 2
Query:  380 DTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILXSLGV--CPVENGGNPFDHCFTSNMREDSQKLMRCDYEDSAGVQLAKALPPRWK 868
            D K  + E L K+ ++E    + K   L  EL A + R+LRIS++++N+RKRT+KE+  + T+A  +V+ ++L VLDN ERA     +  +G  E +    +   +Q  + L  L V     ENG +P  H          Q +M  + E S   Q+A+     +K
Sbjct:   44 DEKVIDFEEL-KALKEENTMFKSKTKKLENELEALKDRLLRISSEYENYRKRTDKEKERIYTDACEDVLIKMLPVLDNLERA-----LAVDGTVEDLKKGVEMTVRQFEDALEKLQVEEISTENGFDPELH----------QAMMVVEQEGSEPNQVAQVFQKGYK 193          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_CLOP1 (Protein grpE OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=grpE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 2
Query:  380 DTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILXSLGV--CPVENGGNPFDH 763
            D K  + E L K+ ++E    + K   L  EL A + R+LRISA+++N+RKRT+KE+  + T+A  +V+ ++L VLDN ERA     +  +G  E +    +   +Q  + L  L V     ENG +P  H
Sbjct:   44 DEKVIDFEEL-KALKEENTMFKSKTKKLENELEALKDRLLRISAEYENYRKRTDKEKERIYTDACEDVLIKMLPVLDNLERA-----LAVDGTVEDLKKGVEMTVRQFEDALEKLQVEEISTENGFDPELH 168          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_CLOAB (Protein grpE OS=Clostridium acetobutylicum GN=grpE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  311 EEAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILXSLGVCPVENGG 748
            E+  T    E ++    +  S+ + ++   E   ++  +E + L+ +   L  EL A + R+LR+SA+++N+R RT KE+  + T+A  +V+  +L  LDN ERA       TEG  E I    + + KQ    L  LG+  + + G
Sbjct:   12 EDEETIASQEEIEVEGNSEESSKEEESNNSEISDENLSEENLKLKDENEKLKNELDAAKDRLLRLSAEYENYRNRTAKEKEGIYTDACSDVINEMLPTLDNLERA-----ASTEGSAEDIKKGVEMVVKQFKNSLSKLGIEEIPSEG 153          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_ALKOO (Protein grpE OS=Alkaliphilus oremlandii (strain OhILAs) GN=grpE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 2
Query:  359 EALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD-HCFTSNMREDSQ 796
            E++ SN +    E+E+   + ED    LE+K+   + +     ++  R+ ADF N++KR EKE+  +   A  ++   LL ++DNFERA  Q   +TE  + +      +YKQL++ L   GV  +E    PFD +   + M+E+S+
Sbjct:   16 ESVDSNLEATVEEMESTKGTSED----LEQKLAEKTAQYEDIFSQFQRLQADFTNYKKRVEKEKGDIYLYANEKIALDLLNIIDNFERA-IQSTEKTEENDSLLQGISLVYKQLLDTLTKHGVEEIEAMEKPFDMNLHYAVMQEESE 157          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_BACCN (Protein grpE OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=grpE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 44/154 (28.57%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  311 EEAPTSFIMETLQSY-KEALASNDDTKAAEIEALLKSFEDEKID---LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            EE     + ET ++  +EA    +  ++   EA  ++  +EK +   L+ KV  L  +L+    R+LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +Y+QL+E L   GV  +E  G  FD
Sbjct:    2 EERNEQVVEETKEAQTEEATIEKNSEESVTEEATEETVVEEKSEAALLQEKVDELQAKLTETEGRMLRLQADFENYKRRVQLDKQAAEKYRAQSLVSDILPALDNFERA-MQVEASDEQTKSLLQGMEMVYRQLLEALNKEGVEMIEAVGKQFD 154          
BLAST of EY692949 vs. ExPASy Swiss-Prot
Match: GRPE_GEOKA (Protein grpE OS=Geobacillus kaustophilus GN=grpE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  425 DEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEE--KINNSYQSIYKQLVEILXSLGVCPVENGGNPFD 760
            +E    + ++  L  +LS    R LR+ ADF+NFR+RT +E  +        +   LL VLDNFERA   +K++T+ E+   I    + +Y+ LV+ L   GV  +E  G PFD
Sbjct:   59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERA---LKIETDNEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFD 169          
The following BLAST results are available for this feature:
BLAST of EY692949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GRPE_BACP23.256e-1135.40Protein grpE OS=Bacillus pumilus (strain SAFR-032)... [more]
GRPE_GEOTN4.252e-1132.88Protein grpE OS=Geobacillus thermodenitrificans (s... [more]
GRPE_CLOPS5.553e-1131.33Protein grpE OS=Clostridium perfringens (strain SM... [more]
GRPE_CLOP15.553e-1135.11Protein grpE OS=Clostridium perfringens (strain AT... [more]
GRPE_CLOAB5.553e-1129.25Protein grpE OS=Clostridium acetobutylicum GN=grpE... [more]
GRPE_ALKOO5.553e-1131.29Protein grpE OS=Alkaliphilus oremlandii (strain Oh... [more]
GRPE_BACCN7.253e-1128.57Protein grpE OS=Bacillus cereus subsp. cytotoxis (... [more]
GRPE_GEOKA9.473e-1135.96Protein grpE OS=Geobacillus kaustophilus GN=grpE P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-B07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692949 ID=EY692949; Name=EY692949; organism=Citrus sinensis; type=EST; length=885bp
TTGCCGACCCACGCGTCCGCGTGCAGCCCCTATTTCCTTAAAATCTCCGA
AACCCATCTGTATTTCCTTCAGACAACGTCTAATAAGCACCAGCAGACTT
TATCATCGGTCAAATTCTCTCCGGTTCGTAAGTGTTCAGTCTCTCCGGTT
CGTAAAGTTCTCTCCTTTAGCTTCAACTGGAGAAACTGAAACCCAAGAGG
AAATTCAGGAACCCCAAATTGAGGAATCTTCCGATGGTGCTGTTGGCATT
GAAGATGGCACTAGTGACGATGATAGCTCTGGAGCTACTAGTGATGACAC
CTCAGATGCTGAGGAAGCACCTACTTCATTCATTATGGAAACACTCCAAT
CATACAAAGAAGCTTTGGCCAGTAATGACGATACCAAAGCTGCTGAAATA
GAGGCTTTATTAAAATCCTTTGAAGATGAGAAAATTGATCTTGAGAGGAA
AGTTGTTAACTTGTCTGAAGAATTGTCAGCTGAGAGGGCTCGTATTCTTA
GGATCAGTGCTGACTTTGACAATTTTCGTAAGAGAACGGAGAAGGAACGC
CTTTCACTGGTAACAAATGCTCAAGGAGAAGTCATGGAGAGATTGTTGCA
AGTTTTGGATAATTTTGAGAGAGCTAAAACTCAAATTAAGGTGCAGACCG
AGGGAGAGGAGAAAATAAACAACAGCTATCAGAGCATATATAAGCAATTA
GTGGAAATCCTANGATCACTTGGTGTTTGTCCTGTGGAGAACGGTGGGAA
TCCTTTTGATCATTGCTTCACGAGCAATATGCGCGAGGATTCACAGAAAT
TGATGAGGTGTGATTATGAAGATTCCGCAGGGGTTCAACTGGCGAAGGCT
CTACCTCCTCGATGGAAAGGATCGGCTGGTCAGGG
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