EY692893

Overview
NameEY692893
Unique NameEY692893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692893 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 2
Query:  257 EASAFVNTRVDWKETPEAHVFKADLPGLMXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQI 598
            +A A   T  D KE P A+ F  D+PGL              L ISG+R  E+ + +  + R+ER  G F R+F LP+NA MD+I A   +GVLTVTV K    +    + I++
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREEREDAK-YLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of EY692893 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.602e-11
Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  257 EASAFVNTRVDWKETPEAHVFKADLPGLMXXXXXXXXXXXXXLQISGQRNIEKEDKSD--TWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQI 598
            +A A   T  D KE P ++VF AD+PG+              L +SG+R   ++D+ D   + R+ER  G F R+F LPENA ++ I A  ++GVL VTV K    +    + +++
Sbjct:   49 DAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEV 164          
BLAST of EY692893 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.602e-11
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  257 EASAFVNTRVDWKETPEAHVFKADLPGLMXXXXXXXXXXXXXLQISGQRNI----EKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQI 598
            +A A   T  D K+ P A+ F  D+PGL              L ISG+R      E++++S  + R+ER  G F R+F LP+NA +D+I A  ++GVLTVTV K    +    + I++
Sbjct:   46 DARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163          
BLAST of EY692893 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.733e-11
Identity = 45/118 (38.14%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  284 VDWKETPEAHVFKADLPGLMXXXXXXXXXXXXXLQI--------------SGQRNIEKEDKSD--TWHRVERSSGMFSR---RFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAH 580
            +DW+ETP AHVF+ DLPGL              L++              +G+ + E+E+++D   WH  ER++G       +FRLPE+A  D   A M +GVLTVTVPK  + KK H
Sbjct:   29 MDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPK-RKGKKRH 145          
The following BLAST results are available for this feature:
BLAST of EY692893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HSP21_MAIZE9.394e-1237.7217.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP22_IPONI1.602e-1134.4818.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP18_ORYSJ1.602e-1135.5918.0 kDa class II heat shock protein OS=Oryza sati... [more]
HS178_ORYSJ2.733e-1138.1417.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-E11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692893 ID=EY692893; Name=EY692893; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCTTTCCCAAAGGCATTTACTTTTTCTGCATTCGGTGACA
AGTACTTTTTATTAGTCGATAGAGGAAACAGAGAGGGAAAACAAAAAACA
GGAAAGATAAGGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAACCGACG
CAGCAGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTCAGGG
ACTTCCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCAGTTC
CCTGGAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGGAAAC
CCCAGAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAATGAAAGAGG
AGGTGAAGGTCGAGGTTGAGGATGATAGGGTGCTTCAGATAAGCGGGCAG
AGGAACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGGAGCG
TAGCAGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCGAAGA
TGGACCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTACCGTT
CCTAAAGCGGAGGAGGCCAAGAAAGCTCATGTCAGGGCTATTCAAATCTC
TGGCTGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAAGTGT
TATGGTTTGGTTTGGTCTATGTATCATGTGAAGACTGTCTTTGTCTACTG
AGATCGAGTGTCTTTGTCTGTAATGGGGATGTCAGAATGGGAATATAATG
TAATTTCGTNCNCAACTTAATCTTCTCNAGATCATATCNGGCTTGAAAGA
ATGGGGATCTGCGGTCGCTCTAGAGATACAGCTACGACGCGAGCTGCGAG
TCATAATCGTCTAAGTGCACTAAATCAATCCTGGCGCGTTTACACGCNTG
ACTGGAACCTTGCGTACCNACTATACGCTGACAATCCCTTT
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