EY692887

Overview
NameEY692887
Unique NameEY692887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA2_SCHPO (40S ribosomal protein S0-B OS=Schizosaccharomyces pombe GN=rps0b PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.864e-66
Identity = 124/208 (59.62%), Postives = 156/208 (75.00%), Query Frame = 3
Query:  102 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXTSR 725
            P  L+  + DI+ +LAA+ H+G+KN + +ME YV+KRR+DGI+IINLGKTWEKL +AARVI  IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN +  ++ EPRL+I+TDPR D Q IKEA+  NIP IA CDTDS + +VD+ IP NNKG  SIG  ++LLAR VL++RG I     W+VM DL+FYR+PE   R
Sbjct:    8 PSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVMPDLYFYRDPEEIER 215          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_YARLI (40S ribosomal protein S0 OS=Yarrowia lipolytica GN=RPS0 PE=3 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 4.885e-66
Identity = 118/196 (60.20%), Postives = 153/196 (78.06%), Query Frame = 3
Query:  129 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 713
            DIQ +LAA+ H+G+KN   Q   YVFK+R DG+ IIN+GKTWEK+Q+AAR+I A+ NP D++  SAR YGQRAVLKFA +  A AIAGR TPG+FTN +  SF EPRLLI+TDPRTDHQ IKEA+  NIP IA  DTDSP+ +VD+ IP NNKG+HS+G ++W+++R VL++RG +   + +W VM DL+FYR+PE
Sbjct:   12 DIQNLLAAQTHIGSKNVQVQNIPYVFKQRADGVNIINVGKTWEKIQLAARIIAAVPNPADVVAISARTYGQRAVLKFANHCGATAIAGRFTPGSFTNYITRSFKEPRLLIVTDPRTDHQAIKEASYVNIPVIALVDTDSPVEFVDVAIPCNNKGRHSVGLVWWMISREVLRLRGALEDRNTEWSVMPDLYFYRDPE 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_TOXGO (40S ribosomal protein SA OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.885e-66
Identity = 124/211 (58.77%), Postives = 156/211 (73.93%), Query Frame = 3
Query:  108 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHK--WDVMVDLFFYREPEXTSRLKK 734
            +LS +E  I  ML  + H+GTKN + +M  YVFK  ++GI++INL KTWEK+ MAARVIVAIENP D++V SARPYG RAVLKF++Y  A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q ++E+A  N+P IA CDTDSP+ +VDI IP NNKGK SI  ++WLLAR VL +RG + P     WDVMVD+F +R+PE   R ++
Sbjct:    8 KLSLQEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVIVAIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFMEPRLLIVTDPRTDAQAVRESAYANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLRGEL-PSRSVPWDVMVDMFLWRDPEEFERKER 217          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_CHLVR (40S ribosomal protein SA OS=Chlorohydra viridissima PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.203e-64
Identity = 123/201 (61.19%), Postives = 150/201 (74.63%), Query Frame = 3
Query:  111 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            LS KE D+   LAA VHLG+ N     + YVFKR++DGI+IINL KTWEKL +AAR+I +IENP D+ V S+RPYG RAVLKFA+ T A  IAGR TPGTFTNQ+Q  F EPRLLI TDP+ D+Q + EA+  NIP IA C+TDSP+R+VD  IP NN+G  SIG ++W+LAR VL +RG I     W+VM DLFFYR+PE
Sbjct:    8 LSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAARIIASIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTNQIQKRFREPRLLISTDPQHDNQALTEASYVNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNVMPDLFFYRDPE 208          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_USTMA (40S ribosomal protein S0 OS=Ustilago maydis GN=RPS0 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.573e-64
Identity = 116/208 (55.77%), Postives = 153/208 (73.56%), Query Frame = 3
Query:  102 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXTSR 725
            P  L+  E DI ++LAA+ H+GTKN D QM  Y++KRR DGI+++N+GKTWEK+  AAR++ AIENP DI V S R YG RAVLKFA  T A AIAGR TPG+FTN +  SF EPR++++TDPR DHQ I+EA+  NIP I+F D+DSP+++VD+ IP N +G+HS+G L+WLL R VL+++     G    VM D+FFYR+PE   R
Sbjct:    5 PAALNPTEEDISLLLAAQTHIGTKNADKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILAAIENPADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLLCRTVLRIK-----GGDLSVMPDMFFYRDPEEVER 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_DICDI (40S ribosomal protein SA OS=Dictyostelium discoideum GN=rpsA PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.800e-64
Identity = 123/211 (58.29%), Postives = 150/211 (71.09%), Query Frame = 3
Query:  102 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXTSRLKK 734
            P  L+  + DI  MLA + HLG  N D +ME Y +KR+++G +IINL KTWEK+Q+AARVIVAIENP DI V SA+P GQRAVLKFA +  A A +GR TPGTFTNQ+Q+ F EPRLLI+ DP  D QP+ EA+  NIPTIA CDT S +  VDI IP NN+GK+SI  +FWLLAR VL +RGTI     W V VDLF YR+ +     +K
Sbjct:    5 PAALNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIVAIENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIVADPLLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRGTIPRNTTWSVKVDLFIYRDTDEEPEKEK 215          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_THEAN (40S ribosomal protein SA OS=Theileria annulata GN=TA10185 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.126e-62
Identity = 113/207 (54.59%), Postives = 150/207 (72.46%), Query Frame = 3
Query:   93 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            A    +L+  E  I+MML A+VH+GTKN + +M +YV+ R  +G+++INL  T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y  +H IAGR  PGT TNQ+   F EPRLL+ TDPRTD Q +KE++  ++P IA CDTDSP+ YVDI IP NNKGK SI  ++WLLAR VL +R  ++    WDV+VD FF+R+PE
Sbjct:    2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLKESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWRDPE 208          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_BRUMA (40S ribosomal protein SA OS=Brugia malayi GN=Bm1_41245 PE=3 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.471e-62
Identity = 118/203 (58.13%), Postives = 150/203 (73.89%), Query Frame = 3
Query:  120 KEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG--TIRPGHKWD---VMVDLFFYREPE 713
            KE D   +LA + H+G  NCDFQME+YV+KRR DGI+II+L KTWEKL +AAR I AI+NPGD+ V SARPY QRA+LKFA +T +  I GR TPG  TNQ+Q  F EPRLLI++DPR DHQ + EA+   +P I+FC+TDSP++++DI IP NNKG  SIG ++WLLAR VL ++G  T + G   D   +M DL+FYR PE
Sbjct:   11 KEEDAIKLLACQTHVGAANCDFQMEQYVWKRRADGIHIIHLRKTWEKLLLAARAIAAIDNPGDVCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTNQIQKQFKEPRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKGKMTRQTGFVLDDKEIMPDLYFYRNPE 213          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_LACTC (40S ribosomal protein S0 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.921e-62
Identity = 115/196 (58.67%), Postives = 148/196 (75.51%), Query Frame = 3
Query:  129 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYREPE 713
            D Q++LAA VHLG+KN     E YVFK R DG+ ++N+GKTWEK+ +AAR+I AI NP D++  S+R YGQRAVLKF+ +T A AIAGR TPG+FTN +  SF EPRL+I+TDPR+D Q IKE++  NIP IA  D DSP  YVD+ IP NNKGKHSIG +++LLAR VL++RG+ +     W +M DL+FYR+PE
Sbjct:   13 DAQLLLAANVHLGSKNVQVHQEPYVFKTRPDGVNVVNVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNKGKHSIGLIWYLLAREVLRLRGSLVDRTQPWSIMPDLYFYRDPE 208          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_THEPA (40S ribosomal protein SA OS=Theileria parva GN=TP04_0748 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.509e-62
Identity = 112/207 (54.11%), Postives = 150/207 (72.46%), Query Frame = 3
Query:   93 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            A    +L+  E  I+MML A+VH+GTKN + +M +YV+ R  +G+++INL  T EKL++AAR IV + NP +++V SARPYG RAVLKF+ Y  +H IAGR  PGT TNQ+   F EPRLL+ TDPRTD Q ++E++  ++P IA CDTDSP+ YVDI IP NNKGK SI  ++WLLAR VL +R  ++    WDV+VD FF+R+PE
Sbjct:    2 AAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWRDPE 208          
The following BLAST results are available for this feature:
BLAST of EY692887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA2_SCHPO2.864e-6659.6240S ribosomal protein S0-B OS=Schizosaccharomyces ... [more]
RSSA_YARLI4.885e-6660.2040S ribosomal protein S0 OS=Yarrowia lipolytica GN... [more]
RSSA_TOXGO4.885e-6658.7740S ribosomal protein SA OS=Toxoplasma gondii PE=2... [more]
RSSA_CHLVR1.203e-6461.1940S ribosomal protein SA OS=Chlorohydra viridissim... [more]
RSSA_USTMA4.573e-6455.7740S ribosomal protein S0 OS=Ustilago maydis GN=RPS... [more]
RSSA_DICDI7.800e-6458.2940S ribosomal protein SA OS=Dictyostelium discoide... [more]
RSSA_THEAN1.126e-6254.5940S ribosomal protein SA OS=Theileria annulata GN=... [more]
RSSA_BRUMA1.471e-6258.1340S ribosomal protein SA OS=Brugia malayi GN=Bm1_4... [more]
RSSA_LACTC1.921e-6258.6740S ribosomal protein S0 OS=Lachancea thermotolera... [more]
RSSA_THEPA2.509e-6254.1140S ribosomal protein SA OS=Theileria parva GN=TP0... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-E05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692887 ID=EY692887; Name=EY692887; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAGCGAGCAGAAGTCTCCGTCGGTACCACGAGTCTCAGCT
TTCTCTCGCAGGTTTTAAGAAATAAAGATGGCGACCGGAACAGCAACGGC
CCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCCG
CCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTAC
GTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGTAAGAC
TTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAACC
CTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGTG
TTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGGCACAC
TCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCCGAC
TTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGCT
GCCCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTCACCTAT
GCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGCA
TTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGGC
ACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTTCTTCTA
CAGGGAGCCAGAAGNAACAAGCAGGCTGAAGAAAAGAAACTGCTGCTATT
GATTATGCTACAGCAGAGTACACACGAATCTTTACAGTGGTGATCATGGG
CTTCCCAATGCTGATNGTGGGTGGGCGGNTGGTGAANTCAGAACCCATTC
CTGGTGTCCTATTCCCAGAGCACACAGCACTACAGTCCTTGGTGGGGATG
ATGGGATCATGCCGC
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