EY692887

Overview
NameEY692887
Unique NameEY692887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_ASPOR (40S ribosomal protein S0 OS=Aspergillus oryzae GN=rps0 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.343e-68
Identity = 126/210 (60.00%), Postives = 160/210 (76.19%), Query Frame = 3
Query:   99 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 713
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+ DL+FYR+PE
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYRDPE 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFN (40S ribosomal protein S0 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rps0 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.343e-68
Identity = 126/210 (60.00%), Postives = 160/210 (76.19%), Query Frame = 3
Query:   99 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 713
            AP QL    +  + DI+ +LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I A+ENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP +A CDTDSP  +VD+ IP NNKG+HSIG ++W+LAR VL++RGT+     +WDV+ DL+FYR+PE
Sbjct:    2 APSQLPPIFNPTQQDIEQLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAVENPADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVLALCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTLATRETEWDVVPDLYFYRDPE 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_PLAVI (40S ribosomal protein SA OS=Plasmodium vivax GN=PVX_111380 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.060e-68
Identity = 122/200 (61.00%), Postives = 154/200 (77.00%), Query Frame = 3
Query:  114 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++I+NL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD QP+KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++GT+     W VMVD+F +R+PE
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIVAINNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQPVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTLPRSKPWKVMVDMFLWRDPE 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_MALGO (40S ribosomal protein S0 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.996e-68
Identity = 125/209 (59.81%), Postives = 157/209 (75.12%), Query Frame = 3
Query:  102 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYREPEXTSR 725
            P  L+    DI ++LAA+ H+GTKNC+  M  YV KRR DGI++IN+GKTWEKL  AARV+ A+ENP DI V S+R YG RAV KFA  T A AIAGR TPG+FTN +  SF EPR++++TDPR DHQ I+E+A  NIP IA CDTD+P+R+VDI IP NNKG+HSIG L+WLL R  L++RG + R  + W+VMVD+FFYR+PE   R
Sbjct:    6 PAILNPTPEDISLLLAAQTHIGTKNCEKAMLPYVHKRRADGIHLINIGKTWEKLVFAARVLAAVENPADICVISSRTYGHRAVHKFAANTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIRESAYVNIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCREFLRLRGIVPRTPNGWNVMVDMFFYRDPEEIER 214          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_PENCW (40S ribosomal protein S0 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps0 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 5.220e-68
Identity = 125/210 (59.52%), Postives = 160/210 (76.19%), Query Frame = 3
Query:   99 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 713
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ ++N+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD +VDL+FYR+PE
Sbjct:    2 APSQLPPVFNPTAQDIEMLLAAQCHLGSKNLQVHMEPYLWKLRADGVNVLNIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLATRETEWDTVVDLYFYRDPE 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_PLACH (40S ribosomal protein SA OS=Plasmodium chabaudi GN=PC000391.02.0 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.817e-68
Identity = 123/200 (61.50%), Postives = 154/200 (77.00%), Query Frame = 3
Query:  114 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G+I     WDVMVD+F +R+PE
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGSIPRSQAWDVMVDMFLWRDPE 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_PLABA (40S ribosomal protein SA OS=Plasmodium berghei (strain Anka) GN=PB000415.00.0 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.817e-68
Identity = 123/200 (61.50%), Postives = 154/200 (77.00%), Query Frame = 3
Query:  114 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G+I     WDVMVD+F +R+PE
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGSIPRSQAWDVMVDMFLWRDPE 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_PLAF7 (40S ribosomal protein SA OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0264 PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.519e-67
Identity = 122/200 (61.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query:  114 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPE 713
            S KE  I  ML  +VH+GTKN + +M+RYV+ R  DG++IINL KT+EKLQ+AAR+IVAI NP D++V SARP+G RAVLKFA+YT A AIAGR TPG  TNQ+   F EPRLLI+TDPRTD Q +KE+A  NIP IA CD+DSP+ +VDI IP NNKGK SI  ++WLLA+ VL ++G I     W+VMVD+F +R+PE
Sbjct:    8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAISNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGVIPRSEPWNVMVDMFLWRDPE 207          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA_NANOT (40S ribosomal protein S0 OS=Nannizzia otae (strain CBS 113480) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.519e-67
Identity = 120/196 (61.22%), Postives = 155/196 (79.08%), Query Frame = 3
Query:  129 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYREPE 713
            D++MML A+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CD DSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WD++VDL+FYR+PE
Sbjct:   16 DMEMMLTAQCHLGSKNMQTHMEPYLWKTRPDGVNVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASRETEWDIVVDLYFYRDPE 211          
BLAST of EY692887 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHPO (40S ribosomal protein S0-A OS=Schizosaccharomyces pombe GN=rps0a PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.537e-67
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 3
Query:  102 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEXTSR 725
            P  L+  + DI+ +LAA  H+G+KN + +M+ YV+KRR+DG++I+NLGKTWEKL +AARVI  IENP D+ V S R YG RAVLKFA +T A AIAGR TPG FTN +  ++ EPRL+++TDPR D Q IKEA+  NIP IA CDTDS + +VDI IP NNKG+ SIG +++LLAR VL++RGT+     WDVM DL+FYR+PE   R
Sbjct:    7 PNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDLYFYRDPEEVER 214          
The following BLAST results are available for this feature:
BLAST of EY692887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_ASPOR2.343e-6860.0040S ribosomal protein S0 OS=Aspergillus oryzae GN=... [more]
RSSA_ASPFN2.343e-6860.0040S ribosomal protein S0 OS=Aspergillus flavus (st... [more]
RSSA_PLAVI3.060e-6861.0040S ribosomal protein SA OS=Plasmodium vivax GN=PV... [more]
RSSA_MALGO3.996e-6859.8140S ribosomal protein S0 OS=Malassezia globosa (st... [more]
RSSA_PENCW5.220e-6859.5240S ribosomal protein S0 OS=Penicillium chrysogenu... [more]
RSSA_PLACH6.817e-6861.5040S ribosomal protein SA OS=Plasmodium chabaudi GN... [more]
RSSA_PLABA6.817e-6861.5040S ribosomal protein SA OS=Plasmodium berghei (st... [more]
RSSA_PLAF71.519e-6761.0040S ribosomal protein SA OS=Plasmodium falciparum ... [more]
RSSA_NANOT1.519e-6761.2240S ribosomal protein S0 OS=Nannizzia otae (strain... [more]
RSSA1_SCHPO7.537e-6758.1740S ribosomal protein S0-A OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-E05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692887 ID=EY692887; Name=EY692887; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAGCGAGCAGAAGTCTCCGTCGGTACCACGAGTCTCAGCT
TTCTCTCGCAGGTTTTAAGAAATAAAGATGGCGACCGGAACAGCAACGGC
CCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCCG
CCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTAC
GTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGTAAGAC
TTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAACC
CTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGTG
TTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGGCACAC
TCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCCGAC
TTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGCT
GCCCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTCACCTAT
GCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGCA
TTGGGTGTCTCTTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGGC
ACTATTCGTCCTGGCCACAAGTGGGATGTGATGGTCGATCTGTTCTTCTA
CAGGGAGCCAGAAGNAACAAGCAGGCTGAAGAAAAGAAACTGCTGCTATT
GATTATGCTACAGCAGAGTACACACGAATCTTTACAGTGGTGATCATGGG
CTTCCCAATGCTGATNGTGGGTGGGCGGNTGGTGAANTCAGAACCCATTC
CTGGTGTCCTATTCCCAGAGCACACAGCACTACAGTCCTTGGTGGGGATG
ATGGGATCATGCCGC
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