EY692760

Overview
NameEY692760
Unique NameEY692760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692760 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.166e-70
Identity = 125/222 (56.31%), Postives = 154/222 (69.37%), Query Frame = 2
Query:  146 CCAKGPGYATPLEAMSGPTEKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQNNPEAPSLHKVVEPAHIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAXGNGFLLLDSK-FNVKG*WEKPGHSPAFGYDF*YQPRHKTMISSSWGAPPGFHKGLKLQHVYXGLYG 808
            C   GPGY TPL+AM GP E+++Y+ C+Y  T  +KPDYLATVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R  L+LPSL+S RIYVVD   +P AP LHK VEP  +  K GL+ PHT+HCL SG I++S +GD  GN  G GF+LLD + F V G WE+PG +  FGYDF YQPRH  MIS+ WGAP     G     V  G YG
Sbjct:    5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGETFEVIGNWEQPGDAAPFGYDFWYQPRHNVMISTEWGAPKALGNGFNPADVKAGHYG 225          
BLAST of EY692760 vs. ExPASy Swiss-Prot
Match: SBP_CAEEL (Putative selenium-binding protein OS=Caenorhabditis elegans GN=R11G10.2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.951e-15
Identity = 60/191 (31.41%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  203 EKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSA-QRRFLVLPSLVSGRIYVVDTQNNPEAPSLHKVVEPAHIVQKTGLSYPHTAHCLA--SGDILVSCLGDKDGNAXGNGFLLLDSKFNVKG*WE-KPGHSPAF---GYDF*YQPRHKTMISSSWGAP 754
            ++L  + C     G E+ D +A VD DP+S ++  ++  + +   GDE     W   +   G+ +   RR +++P + SG+IYV+  +N  E   + K +    +++K  +S P+    L      + VS LGD+ GN  G+ F+L+D +      WE +    P F   G DF  QPRH  MISS WG P
Sbjct:   89 DELFAIVCCPHSIGYER-DKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESLGEMNKFVRRNIIVPCMNSGKIYVIAFEN--EKLWIEKEIRNDELIRKD-VSCPYAVRSLPLKGAPVHVSTLGDRFGNGKGD-FILIDRRT-----WEVRKKSEPTFSDYGGDFSLQPRHNLMISSEWGHP 269          
The following BLAST results are available for this feature:
BLAST of EY692760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SBP1_DANRE1.166e-7056.31Selenium-binding protein 1 OS=Danio rerio GN=selen... [more]
SBP_CAEEL6.951e-1531.41Putative selenium-binding protein OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-B07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692760 ID=EY692760; Name=EY692760; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCCCACGCGTCCGCGGACGCGTGGGTGATCTTTCTTCAAA
GTCTTTGTGTTGTTCTGTCTGTGTTTTTTTTCTTGTAAGAAATGGCAACT
GATACTGTGGTGGCTGAACACCGGTCGAGCAATAATGGGCATGGTTGCTG
CGCGAAAGGGCCTGGGTATGCAACTCCACTCGAAGCCATGTCTGGTCCTA
CAGAGAAACTTCTCTATGTCACTTGTCTTTACACTGGTACTGGAAGAGAG
AAGCCTGATTACCTAGCGACAGTGGATGCGGATCCTAGCTCTTCTTCTTA
TTCAAAAGTTATTCATCGGCTCCCTGTGCCATACATTGGTGATGAACTAC
ATCATTCGGGATGGAATTCATGTAGCTCATGCTATGGAGATTCATCTGCT
CAACGGCGTTTTCTTGTCTTGCCTTCTTTGGTATCTGGTCGTATATACGT
AGTTGACACACAAAATAATCCAGAGGCTCCCTCTTTGCATAAAGTTGTTG
AGCCTGCACATATTGTACAGAAGACAGGATTATCTTATCCTCACACGGCT
CATTGCCTTGCTTCTGGTGATATCCTGGTGTCATGCCTTGGAGATAAGGA
TGGAAATGCTGANGGAAATGGATTTCTTCTCCTTGACTCAAAATTCAATG
TGAAAGGCTGATGGGAAAAACCAGGTCACAGTCCTGCTTTCGGTTATGAT
TTCTAGTACCAACCTCGACACAAAACAATGATCAGCTCATCATGGGGAGC
ACCCCCTGGCTTTCACAAAGGACTGAAACTTCAGCATGTNTATNATGGTC
TTTATGGAGGCATCTGTTGTGTACAGCTGCCGGATGATGAATTGAAAAGA
CATTAAATCGTCGTAAACAGGCCTAATACACTGGAGATAAGGTTCTGCCT
AATCCCTTAAAATATTAGGTTGGAGGGTGGCCTTAACAAAA
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