EY692745

Overview
NameEY692745
Unique NameEY692745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_PONAB (60S ribosomal protein L31 OS=Pongo abelii GN=RPL31 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.174e-23
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  115 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVID 462
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K MGT DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +D
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVD 123          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_DROME (60S ribosomal protein L31 OS=Drosophila melanogaster GN=RpL31 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.274e-21
Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 1
Query:  106 TMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 471
            T  EK  K    EVVTRE TI+L KR+H   FKK+AP+AIKEIRKFA++ MGTTDVR+D +LNK +WS                  ND+ED+  + Y+ VT   +P    K L T+ ++  D
Sbjct:    4 TKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQTENVESSD 123          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_DICDI (60S ribosomal protein L31 OS=Dictyostelium discoideum GN=rpl31 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 1
Query:  142 EVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVI 459
            E VTREYTINLHKRL+G TFK +APKA+K+++ FAQK MGT DVR+D KLNK +WS                  N++E+A E+ Y++ ++  +  +  KGL TK +
Sbjct:    5 EAVTREYTINLHKRLYGTTFKDRAPKAVKQVKLFAQKIMGTKDVRIDNKLNKFLWSQGIKNVPHRVRVTLSRKRNEDENATEKLYTVASLVIV--KSFKGLQTKKV 108          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_ASHGO (60S ribosomal protein L31 OS=Ashbya gossypii GN=RPL31 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  139 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 471
            ++VVTREYTINLHKRLHG TFKK+AP+A+KEI+KFA+  MGT DVR+D +LN ++W                   N+E+ A    +S V    +     KGL T V++EE+
Sbjct:    5 KDVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVKGVPFRMRLRISRRRNEEDTAPPPLFSYVEPVVV--ASAKGLHTVVVEEEE 113          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_AEDAE (60S ribosomal protein L31 OS=Aedes aegypti GN=RpL31 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.100e-20
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  100 ATTMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 471
            A T  EK  K    EVVTRE TINL++RLH   +KK+AP+A+K +RKFA+K MGT DVR+D +LNK +W                   ND+ED+  + Y+LVT   +P    K L T+ ++  +
Sbjct:    2 AKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_DROVI (60S ribosomal protein L31 OS=Drosophila virilis GN=RpL31 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.354e-20
Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  100 ATTMVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVW----SXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 471
            A T  EK  K    EVVTRE TI+L KR+H   FKK+AP+AIKEIRKF ++ MGT DVR+D +LNK +W    S                  ND+ED+  + Y+LVT   +P    K L T+ ++  D
Sbjct:    2 AKTKGEKRNKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGISLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNLQTENVESSD 127          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_CANGA (60S ribosomal protein L31 OS=Candida glabrata GN=RPL31 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.354e-20
Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 1
Query:  139 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 468
            ++VVTREYTIN+HKRLHG +FKK+APKA+KEI+KFA+  MGT DVR+  +LN+++W                   N+EE+AK   +S V    +     KGL T V++E+
Sbjct:    5 KDVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVKGVAFRLRLRISRKRNEEENAKNPLFSYVEPVFV--ASAKGLQTTVVEED 112          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31B_YEAST (60S ribosomal protein L31-B OS=Saccharomyces cerevisiae GN=RPL31B PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.354e-20
Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  139 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 468
            ++VVTREYTINLHKRLHG +FKK+AP+A+KEI+KFA+  MGT DVR+  +LN+ +W                   N+EEDAK   +S V    +     KGL T V++E+
Sbjct:    5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31A_YEAST (60S ribosomal protein L31-A OS=Saccharomyces cerevisiae GN=RPL31A PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.354e-20
Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  139 EEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 468
            ++VVTREYTINLHKRLHG +FKK+AP+A+KEI+KFA+  MGT DVR+  +LN+ +W                   N+EEDAK   +S V    +     KGL T V++E+
Sbjct:    5 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 112          
BLAST of EY692745 vs. ExPASy Swiss-Prot
Match: RL31_CAEEL (60S ribosomal protein L31 OS=Caenorhabditis elegans GN=rpl-31 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.116e-17
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 1
Query:  115 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 471
            EK  +    EVVTREYTI++H R+ G   KK+AP+AI EI+KFA+  M T DVRVD KLNK +WS                  N++ED+ ++ Y+L T   +P     GL    +D E+
Sbjct:    6 EKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTY--VPCTNFHGLTNVNVDSEE 122          
The following BLAST results are available for this feature:
BLAST of EY692745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_PONAB5.174e-2347.4160S ribosomal protein L31 OS=Pongo abelii GN=RPL31... [more]
RL31_DROME1.274e-2145.0860S ribosomal protein L31 OS=Drosophila melanogast... [more]
RL31_DICDI2.403e-2047.1760S ribosomal protein L31 OS=Dictyostelium discoid... [more]
RL31_ASHGO2.403e-2045.9560S ribosomal protein L31 OS=Ashbya gossypii GN=RP... [more]
RL31_AEDAE4.100e-2041.9460S ribosomal protein L31 OS=Aedes aegypti GN=RpL3... [more]
RL31_DROVI5.354e-2042.9760S ribosomal protein L31 OS=Drosophila virilis GN... [more]
RL31_CANGA5.354e-2045.4560S ribosomal protein L31 OS=Candida glabrata GN=R... [more]
RL31B_YEAST5.354e-2046.3660S ribosomal protein L31-B OS=Saccharomyces cerev... [more]
RL31A_YEAST5.354e-2046.3660S ribosomal protein L31-A OS=Saccharomyces cerev... [more]
RL31_CAEEL1.116e-1741.1860S ribosomal protein L31 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-A03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692745 ID=EY692745; Name=EY692745; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGCCCTATATTTATTGCTGTGGCGCTCTAGGGTTTTGTTTT
AGCAGCCGCAGACGCAGAGTGTAGAAGCTCGAGAGCAGAAAAAGAAGAAG
CAACAACAATGGTGGAGAAAGCTGGTAAAGGAAGAAAAGAAGAGGTCGTC
ACTCGCGAATATACCATTAATCTCCACAAACGCTTGCATGGCTGCACCTT
CAAGAAGAAAGCTCCAAAAGCCATAAAGGAAATTAGGAAGTTTGCTCAAA
AAGCCATGGGGACAACTGATGTTAGGGTGGATGTGAAGCTCAACAAGCAA
GTGTGGAGCCGTGGTATCCGTAGTGTACCAAGGAGAATTCGTGTTCGTGT
TGCACGGAAGAGAAACGATGAGGAAGATGCCAAAGAAGAGTTCTACTCTC
TCGTCACTGTTGCCGAGATCCCTCCAGAAGGACTCAAGGGGTTGGGCACC
AAGGTCATTGATGAGGAAGATTGAAGCAACCTTTCTGTTTAGCTAAGGAA
CTCCAAATTTTGGCTATAATTNTATCTTATTCAGTTGCTTTTTTGGTTTT
GGATTTACTTTTTAGAACTGCCTTGGGCCAAAAAAGGTTTCGTGAACGTA
TTGTGATTTATGCATTTACCCTGTTTAAGATTTCTGATACTTCATTCAAA
AACCNNNNANAAAAAAAAAAAAAAAANNAAAAANNAANANNAAANNAAAA
AAAAAAAAAAAAAAAANNNNNNNNANANAAANANANANNNNNNNNNAAAA
AAGGGGGGGCGCTTTAGAGAACCAAGTTTCTTCCCGGGGATTGGAAGTTA
TGCTTTTTTATGGGGACCTAAATATAATCCTGGGGCGGGTTTTACAACGT
GGGAGCGGGGAACCCCGGGGTTTCCCAAATTTAATACTTTGGGAAATATC
CTCTTTTCCCAGGGGGGGAAAATA
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