EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.262e-18
Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  101 AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            A+P P+ Q       +FIN EW + V +K  P VNP+T E++  +     EDV+ AV AAR A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+    +T     +P++ +F SY   EP+GV G I
Sbjct:   26 AVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAF--QLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-----IPIDGDFFSYTRHEPVGVCGQI 184          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.180e-18
Identity = 58/166 (34.94%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  101 AIPIPSRQ-------LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            A+P P++Q       +FIN EW + V KK  P VNP+T +++  +      DV+ AV AAR A     G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+    +T     +P++ ++ SY   EP+GV G I
Sbjct:   27 AVPTPNQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAF--QLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKT-----IPIDGDYFSYTRHEPVGVCGQI 185          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            I I   +LFIN EW E V  K  P+ NP TEE + ++  A  EDV+ AV AAR+A     G  W +   + R + +  +A  I   +  LA LE+I+ GK    A + D+D       Y A  A+ +  +T     +P++  F SY   EPIGV GLI
Sbjct:   16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAF--QMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRT-----IPVDGEFFSYTRHEPIGVCGLI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 2
Query:   86 GKMAMAIP-IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            G   + +P I   +LFING++ +    K    ++P   E++  I     EDV+LAV+AAR A        W   +G  RAK +   A  I E   ELA L+ +D GK  +   + DI   AG F Y A  A+ +  +T   + +  ++   Y LKEPIGVVG I
Sbjct:    8 GATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFDHG---PWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGET---LKMTRQSLFGYTLKEPIGVVGNI 165          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  110 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            +P +QL+I+G+  +    K    VNP T E++ ++  A+  DVE AV +A +       K W++ +   R++ LR     + ER  ELA+LET+D GK L E    DI   A   EYYA LA  +       + LPL E+   Y  +EP+GVV
Sbjct:    4 LPVQQLYIHGQRVDATSGKTFKTVNPATGEVIAEVQVASQADVERAVQSASEG-----QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEG-----IQLPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15
Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            I I   +LFIN EW + V  K  P+ NP TEE + ++  A  EDV+ AV AAR+A     G  W +   + R + +  +A  I   +  LA LE+I+ GK    A + D+D       Y A  A+ +  +T     +P++  F SY   EPIGV G I
Sbjct:   16 IKIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAF--QMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRT-----IPVDGEFFSYTRHEPIGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW + V  K+ P++NP TEE++  +      DV+ AV AARQA     G  W +   + R + L  +A  +   +  LA +E+++ GK    A + D++      +Y+A  A+ +  QT     +P + N  +Y  +EPIGV G I
Sbjct:   16 LKIQHTKIFINNEWHDSVSSKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAF--QIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQT-----IPSDGNIFTYTRREPIGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.909e-15
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFE---YYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW + V  K+ P+ NP TEE +  +     EDV+ AV AARQA     G  W +   + R + L  +A  I   +  LA +E+++ GK    A   ++D+AGC +   Y A  A+ +  +T     +P++ NF +Y   EPIGV G I
Sbjct:   16 LKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAF--QIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAY--LNDLAGCIKTLRYCAGWADKIQGRT-----IPIDGNFFTYTRHEPIGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.800e-15
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  110 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGV 559
            IP  QLFI+ +W + V KK  P V+P T E++G +      DV+LA  AAR A     G  W       R   L  +A  +      LA+LE++D GKP +E+ V D+D+V   + Y+A  A+    +T   + +  E+F  +   EP+GV
Sbjct:   28 IPDNQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAF--RLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKT---IPMDGEHF-CFTRHEPVGV 172          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15
Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  110 IPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            +P +QL+I+G+  +    K    VNP T +++ ++  A+  DVE AV +A +       K W++ +   R++ LR     + ER  ELA+LET+D GK L E    DI   A   EYYA LA  +       + LPL E+   Y  +EP+GVV
Sbjct:    4 LPVQQLYIHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEG-----QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEG-----IQLPLRESSFFYTRREPLGVV 146          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
ALDH2_MOUSE1.262e-1836.14Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_BOVIN8.180e-1834.94Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH1_ELEED9.044e-1736.71Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL2C4_ARATH1.306e-1534.76Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
BETB_STRMK1.706e-1535.95Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
ALDH1_MACPR1.706e-1535.44Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
AL1A7_MOUSE2.228e-1531.65Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1A1_HUMAN2.909e-1534.38Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1B1_BOVIN3.800e-1534.44Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
BETB_STRM54.963e-1535.29Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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