EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14
Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFE---YYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            ++FIN EW   V  K+ P+ NP TEE + ++     EDV+ AV AARQA     G  W +   + R + L  +A  I      LA +E ++ GK    A   + D+ GC +   Y A  A+ +  +T     +P++ NF +Y   EP+GV G I
Sbjct:   22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAF--QIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAY--LMDLGGCIKTLRYCAGWADKIQGRT-----IPMDGNFFTYTRSEPVGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 54/166 (32.53%), Postives = 78/166 (46.99%), Query Frame = 2
Query:  101 AIPIPSRQL-------FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            A+P P R L       FIN EW E    K+    NP+T E + ++      DV+ AV+AA+ A  R  G  W       R + L  +A  +   ++ LA LET+D GKP   A + D++       Y+A  A+ +  +T  P     +N   +   EPIGV G IT
Sbjct:   19 ALPRPIRNLEVKFTKIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQR--GSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRTLRYFAGWADKIQGKT-IPTD---DNVVCFTRHEPIGVCGAIT 178          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC---FEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW   V  K+ P++NP TEE++  +      DV+ AV AARQA     G  W +   + R + L  +A  +   +  LA +E ++ GK    A   + D+ GC    +Y A  A+ +  QT     +P + +  +Y  +EPIGV G I
Sbjct:   16 LKIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAF--QIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAY--LSDLGGCIKALKYCAGWADKIHGQT-----IPSDGDIFTYTRREPIGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            QL+I+G + E    K    +NP   EI+  +  A+ +D+E AV +A+Q       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 QLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG-----QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 53/166 (31.93%), Postives = 79/166 (47.59%), Query Frame = 2
Query:  101 AIPIPSRQL-------FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            A+P P R L       FIN +W E    ++    NP+T E + ++      DV+ AV+AA+ A  R  G  W       R + L  +A  +   ++ LA LET+D GKP   A + D++     F Y+A  A+ +  +T  P     +N   +   EPIGV G IT
Sbjct:   19 ALPRPIRNLEVKFTKIFINNDWHESKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQR--GSPWRRLDALSRGQLLHQLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRT-IPTD---DNVVCFTRHEPIGVCGAIT 178          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AL1A1_BOVIN4.201e-1433.77Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A3_HUMAN5.487e-1432.53Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
AL1A1_MOUSE5.487e-1431.88Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
BETB_ACIBY1.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT1.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS1.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC1.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB51.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB31.222e-1334.90Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
AL1A3_MOUSE1.222e-1331.93Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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