EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDA_STAAB (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.596e-13
Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 2
Query:  125 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            LFINGE+ +    + I + NP T E +  I  A  +DV+ AV+ A++A      + WS  S + RA+ LR I  K+  +K ++A +ET++ GKP+ E    DI   A  F Y+A + E      +  V+   ++  S V  EPIGVVG +
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVEVAQEAF-----ESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIE----TEEGTVNDIDKDTMSIVRHEPIGVVGAV 155          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.596e-13
Identity = 51/154 (33.12%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFE---YYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            ++FIN EW + V  K+ P+ NP TEE + ++     EDV  AV AARQA     G  W +   + R + L  +A  +   +  LA +E+++ GK    A   + D+ GC +   Y A  A+ +  +T     +P + NF +Y   EP+GV G I
Sbjct:   21 KIFINNEWHDSVSGKKFPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAF--QIGSPWRTMDASERGRLLYKLADLVERDRLILATMESMNGGKLFSNAY--LMDLGGCLKTLRYCAGWADKIQGRT-----IPSDGNFFTYTRHEPVGVCGQI 165          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 2
Query:  113 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVVGLI 571
            P + L+I G +          +VNP T E++ ++  A A+D++ AVD+A+        + W++ +   R++ L    A + ER   LA LET++ GKPL E    DI   A   EYYA +A+ L       V +PL E    Y   EP+GVVG I
Sbjct:    5 PDQLLYIGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAGQ-----RHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQG-----VQVPLREGSFFYTRHEPLGVVGAI 149          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 2
Query:  113 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVVGLI 571
            P + L+I G +          +VNP T E++ ++  A A+D++ AVD+A+        + W++ +   R++ L    A + ER   LA LET++ GKPL E    DI   A   EYYA +A+ L       V +PL E    Y   EP+GVVG I
Sbjct:    5 PDQLLYIGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAGQ-----RHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQG-----VQVPLREGSFFYTRHEPLGVVGAI 149          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 2
Query:  113 PSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVVGLI 571
            P + L+I G +          +VNP T E++ ++  A A+D++ AVD+A+        + W++ +   R++ L    A + ER   LA LET++ GKPL E    DI   A   EYYA +A+ L       V +PL E    Y   EP+GVVG I
Sbjct:    5 PDQLLYIGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAGQ-----RHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQG-----VQVPLREGSFFYTRHEPLGVVGAI 149          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            +L+I+G++ +    K    +NP T E++  I  A+  D+E AV +A +       K W++ +   R++ LR     + ER  ELA LET+D GK   E +  DI   A   EYYA LA  +  +      +PL E+   Y  +EP+GVV
Sbjct:    8 RLYIHGQYTDATSGKTFDSINPATGEVIATIQQASQTDIEAAVKSAAEGQ-----KVWAAKTAVERSRILRRAVDILRERNDELAQLETLDTGKAFSETSTVDIVTGADVLEYYAGLATAIQGE-----QVPLRESSFFYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 49/158 (31.01%), Postives = 81/158 (51.27%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW+     +  P+ NP T E V ++  A   D++ AV AAR A S   G  W     + R + L  +A  +   ++ LA +E+++ GKP  +A + D+  V   F YYA  A+ +   T     +P++ ++ ++   EPIGV G I
Sbjct:   33 LEIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFS--LGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMT-----IPVDGDYFTFTRHEPIGVCGQI 183          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13
Identity = 56/150 (37.33%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            +QL+ING + +         VNP   +I+  I +ATA DV+ AV AA         K W++ +   R++ LR     + ER  ELA LET D GKPL E    DI   A   EYYA L   L  Q      +PL +    Y  +EP+GVV
Sbjct:    7 QQLYINGAYVDSTGNDTFDAVNPANGDIIACIQSATAADVDRAVSAATAGQ-----KVWAAMTAMERSRILRRAVDILRERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQ-----QIPLRDTSFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFE---YYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW + V  K+ P++NP TEE +  I      DV+ AV AARQA     G  W +   + R + L  +A  I   +  LA +E+++ GK    A   + D+ GC +   Y A  A+ +  +T     +P++ +F  Y   EP+GV G I
Sbjct:   11 LKIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAF--QIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAY--LMDLGGCIKTLRYCAGWADKIQGRT-----MPMDGDFFCYTRHEPVGVCGQI 161          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: IOLA2_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13
Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 2
Query:  128 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVG 565
            +INGEW E    K   +VNP T+E++  +P +T ED+E A   A +A      K WS  +   RA+ L      +T+ K ELA+L TI+ GK  +EA+ ++       E+ A     +   + A ++  +E   +   + PIGVVG
Sbjct:   10 YINGEWVESKTDKYEDVVNPATKEVLCQVPISTREDIEYAAQTAAEAF-----KTWSKVAVPRRARILFNFQQLLTQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLATIATDVE---AANYRYPIGVVG 147          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
ALDA_STAAB1.596e-1335.33Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
AL1A1_HORSE1.596e-1333.12Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
BETB_XANCP2.085e-1334.19Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB2.085e-1334.19Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC82.085e-1334.19Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_ACIAD2.085e-1333.56Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
AL1A2_HUMAN2.085e-1331.01Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2... [more]
BETB_ERWCT2.723e-1337.33Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
AL1A1_RABIT2.723e-1332.50Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
IOLA2_BACLD3.557e-1332.88Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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