EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.645e-13
Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +    K    VNP   E++ +I +A+AEDV  AV +A         K W++ +   R++ LR     + ER  ELA LET+D GK + E    DI   A   EYYA L   +  Q      +PL +    Y  +EP+GVV
Sbjct:    7 QKLYINGAYVDSTDGKTFNAVNPANGEVLAEIQSASAEDVNRAVASAASG-----QKVWAAMTAMARSRILRRAVDILRERNDELAALETLDTGKAMSETTAVDIVTGADVLEYYAGLIPSIEGQ-----QIPLRDTSFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13
Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  125 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEE-AVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            LFINGE+ +    + I + NP T E +  I  A  +DV+ AV  A+ A      + WS  S + RA+ LR I  K+  +K ++A +ET++ GKP+ E    DI   A  F Y+A + E      +  V+   ++  S V  EPIGVVG +
Sbjct:   15 LFINGEFVKGSSDETIEVTNPATGETLSHITRAKDKDVDHAVKVAQDAF-----ESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIE----TEEGTVNDIDKDTMSIVRHEPIGVVGAV 155          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13
Identity = 49/158 (31.01%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW + V  K+ P++NP TEE++  +      DV+ AV AARQA     G  W +   + R + L  +A  +   +  LA +E I+ GK    A + D+       +Y A  A+ +  QT     +P + +  ++  +EPIGV G I
Sbjct:   16 LKIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAF--QIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQT-----IPSDGDIFTFTRREPIGVCGQI 166          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: SSDH2_SCHPO (Putative succinate-semialdehyde dehydrogenase C139.05 [NADP+] OS=Schizosaccharomyces pombe GN=SPAC139.05 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2
Query:  122 QLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            Q F+ G+W      K   + NP T EI+G +   + E+ + A+ AA +A      K + + +   R++ L   A  I E K +L  + T++ GKPL +A  ++   +G  ++YA  A        AP SL  +NF    +K+P+GV  LIT
Sbjct:   19 QSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAF-----KTYKNFTHVQRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDV-APSSLQSQNF-LISIKQPVGVSALIT 162          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 47/152 (30.92%), Postives = 76/152 (50.00%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            +Q  INGEW +    + I + NP   + +G +P   A++   A+DAA +AL       W + +   RA  LR     + E + +LA L T++ GKPL EA  +I   A   E++A+  + +   T   +     + +  V+K+PIGV   IT
Sbjct:   11 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA-----WRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT---IPGHQADKRLIVIKQPIGVTAAIT 154          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L  Q      +PL      Y  +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQ-----QIPLRGSAFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L  Q      +PL      Y  +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQ-----QIPLRGSAFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L  Q      +PL      Y  +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQ-----QIPLRGSAFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L  Q      +PL      Y  +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQ-----QIPLRGSAFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGVV 562
            ++L+ING + +         VNP   E +  + AA A+DV+ AV AA+Q         W++ +   R++ LR     + +R  ELA +ET D GKPL E    DI   A   EYYA L   L  Q      +PL      Y  +EP+GVV
Sbjct:    7 QKLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG-----QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQ-----QIPLRGSAFVYTRREPLGVV 146          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
BETB_SERP54.645e-1334.67Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
ALDA_STAAS6.067e-1335.33Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
AL1A1_RAT6.067e-1331.01Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
SSDH2_SCHPO7.923e-1331.13Putative succinate-semialdehyde dehydrogenase C139... [more]
GABD_ECOLI7.923e-1330.92Succinate-semialdehyde dehydrogenase [NADP+] OS=Es... [more]
BETB_YERPY7.923e-1334.67Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPS7.923e-1334.67Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP7.923e-1334.67Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN7.923e-1334.67Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPE7.923e-1334.67Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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