EY692712

Overview
NameEY692712
Unique NameEY692712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.035e-12
Identity = 48/158 (30.38%), Postives = 80/158 (50.63%), Query Frame = 2
Query:  104 IPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLE-NFKSYVLKEPIGVVGLI 571
            + I   ++FIN EW+     +  P+ NP T E V ++  A   D++ AV AAR A S   G  W     + R + L  +A  +   ++ LA +E+++ GKP  +A + D+  V     YYA  A+ +   T     +P++ ++ ++   EPIGV G I
Sbjct:   33 LEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFS--LGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMT-----IPVDGDYFTFTRHEPIGVCGQI 183          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: IOLA2_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 2
Query:  128 FINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLIT 574
            +I GEW E +  K   + NP T E++  +P +T  DVE AV AA +A      K WS  +   RA+ L      + +   ELA L TI+ GK   EA  ++     C E+ A     +  +    ++  +E   S + + PIGV+G IT
Sbjct:   13 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVSAANEAF-----KSWSKTAVPKRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIE---SGMYRYPIGVIGGIT 153          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W++ +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L   +  +      +PL E    Y  +EP+GVV
Sbjct:    7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGE-----QIPLRETSFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = 2
Query:  125 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSE-LANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            LFI+GE+ +    K    +NP+ E+ +  +  AT +DV+ AV AAR+A   +    W   + + R + L  +A  + ER +E LA++E +D GK +  A  DI   AGC  YY   A+ +  QT    S  L    +Y   EPIGV G I
Sbjct:   22 LFIDGEFVKGAEGKTFETINPSNEKPIVAVHEATEKDVDTAVAAARKAFEGS----WRQVTPSTRGRMLTKLA-DLFERDAEILASIEALDNGKSITMAHGDIAGAAGCLRYYGGWADKIHGQTIDTNSETL----NYTRHEPIGVCGQI 162          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 2
Query:   74 TERRGKMAMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            T  R +MA  +     +L ING++   V  K   +VNP  E+++ ++  A   DV+LAV AAR A    +  D       +R   +  +A  + +   E+A LE++D GKP E A+  D+     CF Y A LA+ +   T  P S    NF   V ++PIGV G I
Sbjct:    5 TLARLEMAPKVTHIQEKLLINGKFVPAVSGKTFEVVNPADEKVIANVAEAEKADVDLAVKAARHAFESFRMTDCQ-----WRRNLMLRLADILEKNSKEMAALESLDNGKPYEVALNVDVALSVECFRYCAGLADKVNG-TVPPRS---GNFLGIVKRQPIGVCGQI 162          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFK-SYVLKEPIGV 559
            ++L+I G + +    +    ++P T E +  +  A+A DVE AV +AR+       ++W++ +   R++ LR     + ER  ELA LET D GKP+ E +  DI   A   EYYA LA  +  Q      +PL      Y  +EP+GV
Sbjct:    7 QRLYIGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREGQ-----REWAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQ-----QIPLRPTSFVYTRREPLGV 145          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = 2
Query:   95 AMAIPIPSRQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLXAQTKAPVSLPLENFKSYVLKEPIGVVGLI 571
            A+++ I +R LFINGE+      +    V+P T+  +  I    + D++ A+ AAR    R    DWS +S A R   L  +A  +     ELA LET+D GKP+  ++  DI   A    +YA+  + +  +     S  L    + +++EP+GV+  I
Sbjct:   13 ALSLAIENR-LFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERG---DWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHEL----AMIVREPVGVIAAI 164          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  125 LFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGC--FEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVVGLI 571
            L+I G +          +VNP T E++ ++  A A+D++ AVD+A+        + W++ +   R++ L    A + ER   LA LET++ GKPL E    +D V G    EYYA +A+ L         +PL E    Y   EP+GVVG I
Sbjct:    9 LYIGGRYVPARGGHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAGQ-----RQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSE-TRSVDVVTGADVLEYYAGVAQALQG-----AQVPLREGSFFYTRHEPLGVVGAI 149          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W++ +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L   +  +      +PL E    Y  +EP+GVV
Sbjct:    7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-----QIPLRETSFVYTRREPLGVV 146          
BLAST of EY692712 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 2
Query:  119 RQLFINGEWREPVLKKRIPIVNPTTEEIVGDIPAATAEDVELAVDAARQALSRNKGKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEA-VWDIDDVAGCFEYYADLAEGLXAQTKAPVSLPL-ENFKSYVLKEPIGVV 562
            ++L+I G + E         +NP   E++  +  A+ EDVE AV +A +       K W++ +   R++ LR     + ER  ELA LET+D GKPL E    DI   A   EYYA L   +  +      +PL E    Y  +EP+GVV
Sbjct:    7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQ-----KVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-----QIPLRETSFVYTRREPLGVV 146          
The following BLAST results are available for this feature:
BLAST of EY692712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AL1A2_MOUSE1.035e-1230.38Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
IOLA2_BACCZ1.351e-1232.21Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEA71.351e-1234.00Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
ALDH_ASPNG1.351e-1235.33Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH2_LEITA1.351e-1233.53Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
BETB_BURXL2.305e-1232.89Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
PUUC_ECOLI3.011e-1230.63Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_XANC53.011e-1233.55Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_PSEAE3.011e-1234.00Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB3.011e-1234.00Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-F04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692712 ID=EY692712; Name=EY692712; organism=Citrus sinensis; type=EST; length=576bp
CCGGNATTCAAAAACTGACCCACGCGTNCGACCCGAAACTTTTATTAAAC
ANAGAAAAAATAAAAGCCAAAAAACCGAGAGAAGAGGAAAAATGGCGATG
GCGATCCCAATCCCAAGTCGTCAGCTGTTCATCAACGGTGAATGGAGAGA
GCCCGTTCTCAAGAAACGCATCCCAATCGTTAATCCCACCACTGAAGAGA
TCGTCGGTGATATTCCAGCAGCTACTGCTGAAGATGTTGAGCTGGCTGTT
GATGCCGCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTC
TGCATCCGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGA
TAACAGAGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGG
AAGCCACTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTT
TGAGTACTATGCAGACCTTGCTGAAGGCTTANATGCCCAAACAAAAGCTC
CTGTTTCTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCC
ATTGGGGTTGTTGGATTGATTACTCC
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