EY692670

Overview
NameEY692670
Unique NameEY692670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692670 vs. ExPASy Swiss-Prot
Match: DCIP_AZOBR (Indole-3-pyruvate decarboxylase OS=Azospirillum brasilense GN=ipdC PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.563e-12
Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 1 
Query:  313 LGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYAR-SRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTWYQAVVKYXXDAHXLIDTAVSTALKEKQPVYI 792
            L   L R L   GA  +F +PGDF L           L L    +E   G+AAD  AR S  +G   VT+  G  +++NA+AGAY+E  P++ I G P + +     +LHH     D   + + F+ +T  QA +     A   I   +  A    +PVY+
Sbjct:    3 LAEALLRALKDRGAQAMFGIPGDFALPFFKVAEETQILPLHTLSHEPAVGFAADAAARYSSTLGVAAVTYGAGAFNMVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLD--TQFQVFKEITVAQARLDDPAKAPAEIARVLGAARALSRPVYL 161
The following BLAST results are available for this feature:
BLAST of EY692670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
DCIP_AZOBR5.563e-1231.68Indole-3-pyruvate decarboxylase OS=Azospirillum br... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-B10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692670 ID=EY692670; Name=EY692670; organism=Citrus sinensis; type=EST; length=947bp
CCACGCGTCCGAACAAACTCACTATAAAATCTCTCTGGCAAACGCCAATT
TCATTCGTTCATCGAACACTTGTCACACTCTAGAAGTTCAAAAAAAAAAA
AANACATTTCTGAAAGACACTTTTCGGAAACGCATTAACAAACAGACAAT
TCTTCGTCTCCGGCCCTTCAATCAATCATGGACACTAAAATTGGATCACT
CGACACCTGCAAGCCCCCATGCAGCGACTTAGCCAGCCCGCCAAACGGTG
CCGTTTCAACAATCCAATCCTCCGTTCCCGCTACTCCACTCGTCAACCCG
TCCGAGTCGACCCTCGGCCGCCACCTCGCTCGCCGGCTCGTCCAAATCGG
CGCCACCGACGTCTTCTCGGTCCCCGGCGACTTCAACTTGACGCTTCTCG
ACCACCTGATAGCCGAGCCCGGGCTCAACTTGATCGGTTGCTGTAACGAG
CTGAATGCCGGATACGCTGCCGATGGGTACGCTCGCTCGCGTGGGGTCGG
CGCCTGTGTCGTGACCTTCACCGTTGGTGGGCTTAGCGTGCTTAACGCTA
TCGCCGGTGCTTACAGTGAAAATCTGCCGTTGATTTGCATCGTTGGTGGC
CCAAACTCCAATGATTACGGAACCAACAGGATCCTTCATCATACCATTGG
CTTGCCTGATTTTAGCCAAGAACTCAGATGCTTTCAGACTGTCACCTGGT
ATCAGGCTGTGGTGAAATACTNGGNAGATGCACATGANTTGATTGATACG
GCAGTATCAACTGCNTTGAAAGAAAAGCAGCCTGTTTATATCAGCGNTGC
TTGGTACTTGGCTGCGNATNCTCATCCTACTTTTAGCCGAAAGCCCGTTC
ATTTTCGCTTTCTCCAANTNGANTATGAGATGGGCTGGGAGGCTGCANTT
GAGGCACACCAAGTTCTGGACAGGCGTGAAACCAGGTTGGGTGCTGG
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