EY692642

Overview
NameEY692642
Unique NameEY692642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: C4AD1_DROME (Probable cytochrome P450 4ad1 OS=Drosophila melanogaster GN=Cyp4ad1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 46/152 (30.26%), Postives = 80/152 (52.63%), Query Frame = 3
Query:  186 LLNHHDILNKARNELDIQVGTKRQVNESDIKKLV---YLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            L  H +I  KA  E   ++  +    E+D+ +L    YL+ I++E +RLYP+ PL I   +     ++G  V   T + + +  +  +   +++PC F+PERF   +   +V  + F+ +PFS+G R C    FA+  M+  L+ LL  F+I
Sbjct:  321 LSRHSEIQQKAAEE-QRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPSVPL-IARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERF--ENPTGNVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEI 468          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 44/127 (34.65%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  270 DIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKD--TDVRGQN----FELLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            D+K L YL+A++KE++RLYP         +  +  + GY +P GT+L +    L +D  ++    +F PER+L R  D  +DV        F  LPF  G RMC G       M+ T+A+L+  F I
Sbjct:  368 DMKSLPYLRAVIKESLRLYPVT-FGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHI 493          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 42/149 (28.19%), Postives = 64/149 (42.95%), Query Frame = 3
Query:  186 LLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            L  H +   + R E+   +G    V    + ++ Y    +KEA+RLYP  P +    S       G ++P G    I ++ L  +P  W  P  F P RF       D    +   LPFS G R C G  FA+  ++  +A  L  F++
Sbjct:  334 LATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKVFDPSRF-----SPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL 477          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP2E1_MESAU (Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 41/153 (26.80%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  183 LLLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLT---RHKDTDVRGQNFELLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            +L+ + ++  K   E+D  +G  R     D  ++ Y+ A++ E  R     P  +PHE+  +    GY +P GT +   +  L  D   + +P KF+PE FL    + K +D          FS+G+R+C G   A   +   L ++L  F++
Sbjct:  314 ILMKYPEVEEKLHEEIDRVIGPSRVPVFKDRLEMPYMDAVVHEIQRFISLIPSNLPHEATRDTMFRGYVIPKGTVVIPTLDSLLYDSQEFPDPEKFKPEHFLNENGKFKYSD------HFKAFSAGKRVCVGEGLARMELFLLLTAILQHFNL 460          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP2CU_RABIT (Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=CYP2C30 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 44/154 (28.57%), Postives = 68/154 (44.16%), Query Frame = 3
Query:  183 LLLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE----LLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            LL+ H +I  K + E++  +G  R     D   + Y  A++ E  R     P  +PH   ++    GY +P GT +  ++  +  D   +  P KF P  FL      D  G NF+     LPFS G+R C G   A   +   L ++L  F +
Sbjct:  311 LLMKHPEIAAKVQEEIERVIGRDRSPCMQDRSCMPYTDAVIHEIQRYIDMVPNNVPHAVTQDIQFRGYLIPKGTHILPSLTSVLYDEKEFPNPEKFDPGHFL------DASG-NFKKSDYFLPFSIGKRACAGEGLARMELFLVLTTILQHFTL 457          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 42/154 (27.27%), Postives = 68/154 (44.16%), Query Frame = 3
Query:  183 LLLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE----LLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            LLL H ++  K + E++  +G  R     D  ++ Y  A++ E  R     P+ +PH    +     Y +P G  +  ++  +  D   +  P  F P  FL      D  G NF+     +PFS+G+RMC G   A   +   L S+L  F +
Sbjct:  200 LLLKHPEVAAKVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFL------DESG-NFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKL 346          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP2C4_RABIT (Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CYP2C4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 42/154 (27.27%), Postives = 67/154 (43.51%), Query Frame = 3
Query:  183 LLLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFE----LLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            LLL H ++  + + E++  +G  R     D   + Y  A++ E  R     P  +PH    +     Y +P GT +  ++  +  D   +  P  F P  FL      D  G NF+     +PFS+G+RMC G   A   +   L S+L  F +
Sbjct:  309 LLLKHPEVAARVQEEIERVIGRHRSPCMQDRSHMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVKFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL------DESG-NFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKL 455          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP2A7_HUMAN (Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 40/151 (26.49%), Postives = 70/151 (46.36%), Query Frame = 3
Query:  183 LLLNHHDILNKARNELDIQVGTKRQVNESDIKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQ---NFELLPFSSGRRMCPGVSFALPSMQFTLASLLHGF 626
            LL+ H ++  K   E+D  +G  RQ    D  K+ Y++A++ E  R     P+ +     ++     + +P GT++F  +  + RDP  +  P  F P+ FL      D +GQ   +   +PFS G+R C G   A   +     +++  F
Sbjct:  316 LLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRTKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFL------DDKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 460          
BLAST of EY692642 vs. ExPASy Swiss-Prot
Match: CP11A_ONCMY (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Oncorhynchus mykiss GN=cyp11a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  186 LLNHHDILNKARNELDIQVGTKRQVNESD----IKKLVYLQAILKEAMRLYPAAPLLIPHESIEECTVSGYNVPSGTQLFINVWKLQRDPHVWEEPCKFQPERFLTRHKDTDVRGQNFELLPFSSGRRMCPGVSFALPSMQFTLASLLHGFDI 632
            L  H D+    + EL  +V   RQ  + D    +K +  ++  LKE +RL+P A  L  + + EE  +  Y++P GT + + ++ + RDP V+  P K+ P R+L          Q F  L F  G R C G   A   MQ  L  +L  F +
Sbjct:  340 LARHPDL----QEELRAEVAVARQSTQGDMLQMLKMIPLVKGALKETLRLHPVAVSLQRYIT-EEIVIQNYHIPCGTLVQLGLYAMGRDPDVFPRPEKYLPSRWLR------TENQYFRSLGFGFGPRQCLGRRIAETEMQLFLIHMLENFRV 481          
The following BLAST results are available for this feature:
BLAST of EY692642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
C4AD1_DROME6.015e-1130.26Probable cytochrome P450 4ad1 OS=Drosophila melano... [more]
C12C1_DROME6.015e-1134.65Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]
CP4AE_RAT7.856e-1128.19Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP2E1_MESAU7.856e-1126.80Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP... [more]
CP2CU_RABIT7.856e-1128.57Cytochrome P450 2C30 OS=Oryctolagus cuniculus GN=C... [more]
CP2CF_RABIT7.856e-1127.27Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP2C4_RABIT7.856e-1127.27Cytochrome P450 2C4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2A7_HUMAN7.856e-1126.49Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2... [more]
CP11A_ONCMY7.856e-1130.72Cholesterol side-chain cleavage enzyme, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692642 ID=EY692642; Name=EY692642; organism=Citrus sinensis; type=EST; length=790bp
CCACGCGTCCGCAGGAAATGAATCAAGAAGAAGAAGATTTTATGTATGTG
ATGCTTTCGATTTTAGGAGATACAGAGCAATATTATGGTCGTGATGTTGA
TACAATCAATAAAGCTATTTGCCTGGGTCTCATCTTAGCAGCAACGGACA
CCACAGCTGTTACATTGACATGGATTATCTCCCTGCTTCTCAATCATCAT
GATATTCTAAACAAGGCTCGAAATGAACTAGATATTCAGGTGGGCACAAA
AAGGCAAGTGAATGAATCAGATATAAAAAAATTAGTTTACTTACAAGCCA
TTCTTAAAGAAGCAATGCGTTTATATCCTGCTGCGCCACTCTTAATTCCA
CACGAGTCTATAGAAGAGTGCACAGTAAGTGGTTACAATGTTCCCAGCGG
CACACAACTTTTTATCAACGTTTGGAAGCTTCAACGTGATCCCCATGTCT
GGGAAGAGCCTTGTAAGTTTCAGCCAGAAAGATTTTTGACAAGGCACAAG
GATACTGATGTCAGGGGACAAAATTTTGAATTGTTACCTTTTAGTAGTGG
CAGAAGAATGTGTCCTGGAGTTTCATTCGCCCTCCCAAGTATGCAATTTA
CACTTGCTTCTTTACTTCATGGCTTTGATATTGCAACCCCATCAAATGAA
CATTGGACATGGGGGAGGGGATTANGGNTGACCGTAGAGAAATCTACACC
ACTTGAAGTACTTGTCGCTCCACGTCTTTCTGCTTCTTTGACGGCTAAAT
TGATTCTCGATGTATATATCTAATAAACTTTTATGGCAAA
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