EY692639

Overview
NameEY692639
Unique NameEY692639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NDUS7_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.363e-60
Identity = 106/151 (70.20%), Postives = 125/151 (82.78%), Query Frame = 2
Query:  191 AEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDLYYW 643
            AE+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH  A RYD+DRFG++FR SPRQ+DVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGIL LQ+K+ R + L  W
Sbjct:   71 AEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIW 221          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_METFK (NADH-quinone oxidoreductase subunit B OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoB PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.613e-59
Identity = 107/142 (75.35%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + LD V+NY R GS+WPM+FGLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALLYGI+ LQ K+ R
Sbjct:   11 FVTTTLDTVINYTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB2_ACIF5 (NADH-quinone oxidoreductase subunit B 2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB2 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.821e-59
Identity = 106/142 (74.65%), Postives = 119/142 (83.80%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN              CDRIVPVDIYVPGCPPTAEALL+G++ LQKK+ R
Sbjct:   11 FVTTTIDTVVNWGRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSIVRGCDRIVPVDIYVPGCPPTAEALLFGLVQLQKKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_NEOSM (NADH-quinone oxidoreductase subunit B OS=Neorickettsia sennetsu (strain Miyayama) GN=nuoB PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.694e-58
Identity = 103/145 (71.03%), Postives = 125/145 (86.21%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRD 631
            ++++KLDD++N+ R GS+WPM+FGLACCAVEMMH  A+RYD+DRFG+IFRPSPRQSDVM+VAGTLTNKMAPALR+VYDQM +P++VISMGSCAN              CDRIVPVD+YVPGCPPTAEALLYG+L LQKK+NR+R+
Sbjct:   19 YLVAKLDDLINWARSGSLWPMTFGLACCAVEMMHFTASRYDMDRFGMIFRPSPRQSDVMIVAGTLTNKMAPALRRVYDQMAEPKYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVLCLQKKINRQRN 163          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_ACIF2 (NADH-quinone oxidoreductase subunit B OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=nuoB PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.694e-58
Identity = 103/142 (72.54%), Postives = 119/142 (83.80%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN              CDRIVPVDIYVPGCPPTAEAL++G++ LQKK+ R
Sbjct:   11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB1_ACIF5 (NADH-quinone oxidoreductase subunit B 1 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB1 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.694e-58
Identity = 103/142 (72.54%), Postives = 119/142 (83.80%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN              CDRIVPVDIYVPGCPPTAEAL++G++ LQKK+ R
Sbjct:   11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_RHORT (NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.773e-58
Identity = 105/147 (71.43%), Postives = 119/147 (80.95%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDLY 637
            FV+S +D +VN+ R GS+WPM+FGLACCA+EM+H   ARYDLDRFG +FRPSPRQSDVM+VAGTLTNKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPT+EALLYG+L LQKK+ R   LY
Sbjct:   38 FVLSNVDSLVNWARAGSLWPMTFGLACCALEMIHCACARYDLDRFGTVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQKKIKRTGALY 184          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_THIDA (NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans (strain ATCC 25259) GN=nuoB PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.436e-58
Identity = 104/142 (73.24%), Postives = 118/142 (83.10%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +K D ++NY+R GS+WPM+FGLACCAVEMM  GA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL++GI+ LQKK+ R
Sbjct:   11 FVTTKADQLINYMRTGSMWPMTFGLACCAVEMMQAGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQKKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_THISH (NADH-quinone oxidoreductase subunit B OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=nuoB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.406e-58
Identity = 104/142 (73.24%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGIL LQ K+ R
Sbjct:   11 FVTTSADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQNKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_MAGSA (NADH-quinone oxidoreductase subunit B OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=nuoB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.406e-58
Identity = 102/142 (71.83%), Postives = 119/142 (83.80%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV++ +D VVN+ R GS+WPM+FGLACCAVEMMH G +RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPP+AEAL+YGIL LQKK+ R
Sbjct:   39 FVLASVDAVVNWARTGSLWPMTFGLACCAVEMMHAGCSRYDMDRFGVVFRPSPRQSDLMIVAGTLTNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGILQLQKKIRR 180          
The following BLAST results are available for this feature:
BLAST of EY692639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDUS7_MOUSE2.363e-6070.20NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
NUOB_METFK2.613e-5975.35NADH-quinone oxidoreductase subunit B OS=Methyloba... [more]
NUOB2_ACIF55.821e-5974.65NADH-quinone oxidoreductase subunit B 2 OS=Acidith... [more]
NUOB_NEOSM1.694e-5871.03NADH-quinone oxidoreductase subunit B OS=Neoricket... [more]
NUOB_ACIF21.694e-5872.54NADH-quinone oxidoreductase subunit B OS=Acidithio... [more]
NUOB1_ACIF51.694e-5872.54NADH-quinone oxidoreductase subunit B 1 OS=Acidith... [more]
NUOB_RHORT3.773e-5871.43NADH-quinone oxidoreductase subunit B OS=Rhodospir... [more]
NUOB_THIDA6.436e-5873.24NADH-quinone oxidoreductase subunit B OS=Thiobacil... [more]
NUOB_THISH8.406e-5873.24NADH-quinone oxidoreductase subunit B OS=Thioalkal... [more]
NUOB_MAGSA8.406e-5871.83NADH-quinone oxidoreductase subunit B OS=Magnetosp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-G11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692639 ID=EY692639; Name=EY692639; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCCAAAAACACTGCCACGCGCCTCCCTCTCCTCCTCTCGC
AACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGGCCTCC
GGCTCCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCTCC
ACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATTCG
TGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCATC
TGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCACAC
CGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCCCA
GCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACAAG
ATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGGTG
GGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTACT
CTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCTAT
GTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTATGGAATTCTCCC
ACTGCAGAAAAAGATGAACAGGCGCAGAGATTTGTATTATTGGGTGACAA
AGTGAGAAAAGCTCAAGTGGGCTCCTTGGCAGTTACACTCGACTATTATG
TACTAATAAAATCCACTATTTTATCTGGTGTCTGATGAAATGCCATGTAA
AGGGAGAGATATTTTCAGCTGTTTAGAACTACGNTCTGAGAGGGGCTATG
TGGTGCTACACCCATATTCATGAGNTGGATCTTTTGTCTCTGGCTTGCTA
CGCGGATCATGTCCTGTAAAATATTGAAGGCCGAACATTGTTTTTGGGTT
CCAAAAAAAAAAAAAAAAAAAA
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