EY692639

Overview
NameEY692639
Unique NameEY692639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_NITEU (NADH-quinone oxidoreductase subunit B OS=Nitrosomonas europaea GN=nuoB PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.873e-57
Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + LD ++N+ R GS+WPM+FGLACCAVEMM TGA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGI+ LQ K+ R
Sbjct:   11 FVTTSLDSLINWGRTGSMWPMTFGLACCAVEMMQTGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIKR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XYLFT (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=nuoB PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XYLF2 (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain M23) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_VESOH (NADH-quinone oxidoreductase subunit B OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV   LD V+N+ R GS+WPM+FGLACCAVEMM  G++RYDLDRFGI+FRP+PRQSD+M+VAGTLTNKMAPALRKVYDQMP+P+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGI+ LQ K+ R
Sbjct:   11 FVTMSLDRVINWARTGSLWPMTFGLACCAVEMMEAGSSRYDLDRFGIVFRPTPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPKWVISMGSCANGGGYYHYSYAVIRGCDRIVPVDIYVPGCPPTAEALLYGIMQLQDKIRR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_STRMK (NADH-quinone oxidoreductase subunit B OS=Stenotrophomonas maltophilia (strain K279a) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            FV + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDR+VPVD+YVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 FVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_STRM5 (NADH-quinone oxidoreductase subunit B OS=Stenotrophomonas maltophilia (strain R551-3) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            FV + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDR+VPVD+YVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 FVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_RALEJ (NADH-quinone oxidoreductase subunit B OS=Ralstonia eutropha (strain JMP134) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YG++ LQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB2_NITMU (NADH-quinone oxidoreductase subunit B 2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=nuoB2 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.446e-57
Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + LD V+N+ R GS+WPM+FGLACCAVEMM  GA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGI+ LQ K++R
Sbjct:   11 FVTTSLDSVINWGRTGSMWPMTFGLACCAVEMMQAGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIHR 152          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XYLFM (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain M12) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.194e-57
Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANCP (NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv. campestris GN=nuoB PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 3.194e-57
Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
The following BLAST results are available for this feature:
BLAST of EY692639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_NITEU1.873e-5773.94NADH-quinone oxidoreductase subunit B OS=Nitrosomo... [more]
NUOB_XYLFT2.446e-5770.55NADH-quinone oxidoreductase subunit B OS=Xylella f... [more]
NUOB_XYLF22.446e-5770.55NADH-quinone oxidoreductase subunit B OS=Xylella f... [more]
NUOB_VESOH2.446e-5772.54NADH-quinone oxidoreductase subunit B OS=Vesicomyo... [more]
NUOB_STRMK2.446e-5769.86NADH-quinone oxidoreductase subunit B OS=Stenotrop... [more]
NUOB_STRM52.446e-5769.86NADH-quinone oxidoreductase subunit B OS=Stenotrop... [more]
NUOB_RALEJ2.446e-5771.83NADH-quinone oxidoreductase subunit B OS=Ralstonia... [more]
NUOB2_NITMU2.446e-5773.94NADH-quinone oxidoreductase subunit B 2 OS=Nitroso... [more]
NUOB_XYLFM3.194e-5770.55NADH-quinone oxidoreductase subunit B OS=Xylella f... [more]
NUOB_XANCP3.194e-5770.55NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-G11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692639 ID=EY692639; Name=EY692639; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCCAAAAACACTGCCACGCGCCTCCCTCTCCTCCTCTCGC
AACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGGCCTCC
GGCTCCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCTCC
ACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATTCG
TGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCATC
TGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCACAC
CGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCCCA
GCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACAAG
ATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGGTG
GGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTACT
CTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCTAT
GTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTATGGAATTCTCCC
ACTGCAGAAAAAGATGAACAGGCGCAGAGATTTGTATTATTGGGTGACAA
AGTGAGAAAAGCTCAAGTGGGCTCCTTGGCAGTTACACTCGACTATTATG
TACTAATAAAATCCACTATTTTATCTGGTGTCTGATGAAATGCCATGTAA
AGGGAGAGATATTTTCAGCTGTTTAGAACTACGNTCTGAGAGGGGCTATG
TGGTGCTACACCCATATTCATGAGNTGGATCTTTTGTCTCTGGCTTGCTA
CGCGGATCATGTCCTGTAAAATATTGAAGGCCGAACATTGTTTTTGGGTT
CCAAAAAAAAAAAAAAAAAAAA
back to top