EY692639

Overview
NameEY692639
Unique NameEY692639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_THICR (NADH-quinone oxidoreductase subunit B OS=Thiomicrospira crunogena (strain XCL-2) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.448e-57
Identity = 103/141 (73.05%), Postives = 115/141 (81.56%), Query Frame = 2 
Query:  200 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            V +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALLYGI+ LQ K+ R
Sbjct:   12 VTTSADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGIIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_NITEC (NADH-quinone oxidoreductase subunit B OS=Nitrosomonas eutropha (strain C91) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.448e-57
Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV + LD ++N+ R GS+WPM+FGLACCAVEMM TGA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALLYGI+ LQ K+ R
Sbjct:   11 FVTTNLDSLINWGRTGSMWPMTFGLACCAVEMMQTGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIWR 152
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_BURXL (NADH-quinone oxidoreductase subunit B OS=Burkholderia xenovorans (strain LB400) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.448e-57
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++ LQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_BURPP (NADH-quinone oxidoreductase subunit B OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.448e-57
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++ LQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_BURP8 (NADH-quinone oxidoreductase subunit B OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.448e-57
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNR 622
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+YG++ LQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANOR (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae GN=nuoB PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANOP (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   35 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 180
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANOM (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=nuoB PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANC5 (NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
[Close]
BLAST of EY692639 vs. ExPASy Swiss-Prot
Match: NUOB_XANAC (NADH-quinone oxidoreductase subunit B OS=Xanthomonas axonopodis pv. citri GN=nuoB PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 7.116e-57
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2 
Query:  197 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILPLQKKMNRRRDL 634
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+YGIL LQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
The following BLAST results are available for this feature:
BLAST of EY692639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_THICR5.448e-5773.05NADH-quinone oxidoreductase subunit B OS=Thiomicro... [more]
NUOB_NITEC5.448e-5773.94NADH-quinone oxidoreductase subunit B OS=Nitrosomo... [more]
NUOB_BURXL5.448e-5771.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURPP5.448e-5771.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURP85.448e-5771.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_XANOR7.116e-5769.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANOP7.116e-5769.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANOM7.116e-5769.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANC57.116e-5769.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANAC7.116e-5769.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-G11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692639 ID=EY692639; Name=EY692639; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCCAAAAACACTGCCACGCGCCTCCCTCTCCTCCTCTCGC
AACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGGCCTCC
GGCTCCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCTCC
ACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATTCG
TGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCATC
TGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCACAC
CGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCCCA
GCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACAAG
ATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGGTG
GGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTACT
CTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCTAT
GTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTATGGAATTCTCCC
ACTGCAGAAAAAGATGAACAGGCGCAGAGATTTGTATTATTGGGTGACAA
AGTGAGAAAAGCTCAAGTGGGCTCCTTGGCAGTTACACTCGACTATTATG
TACTAATAAAATCCACTATTTTATCTGGTGTCTGATGAAATGCCATGTAA
AGGGAGAGATATTTTCAGCTGTTTAGAACTACGNTCTGAGAGGGGCTATG
TGGTGCTACACCCATATTCATGAGNTGGATCTTTTGTCTCTGGCTTGCTA
CGCGGATCATGTCCTGTAAAATATTGAAGGCCGAACATTGTTTTTGGGTT
CCAAAAAAAAAAAAAAAAAAAA
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