EY692614

Overview
NameEY692614
Unique NameEY692614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG_BACAN (Elongation factor G OS=Bacillus anthracis GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   36 INLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            +N+ID+PGHVDF+ EV  +LR+ DGA+ V+D   GV  QTETV RQA    +  ++ VNKMD+
Sbjct:   77 VNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDK 139          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG_BACAC (Elongation factor G OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   36 INLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            +N+ID+PGHVDF+ EV  +LR+ DGA+ V+D   GV  QTETV RQA    +  ++ VNKMD+
Sbjct:   77 VNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDK 139          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG_BACAA (Elongation factor G OS=Bacillus anthracis (strain A0248) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   36 INLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            +N+ID+PGHVDF+ EV  +LR+ DGA+ V+D   GV  QTETV RQA    +  ++ VNKMD+
Sbjct:   77 VNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDK 139          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG_ACIF5 (Elongation factor G OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   27 EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            E+ IN+ID+PGHVDF+ EV  +LR+ DGA+ V   + GV  Q+ETV RQA   ++  +  VNKMDR
Sbjct:   81 EHRINIIDTPGHVDFTIEVERSLRVLDGAMAVFCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDR 146          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG_ACIF2 (Elongation factor G OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   27 EYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            E+ IN+ID+PGHVDF+ EV  +LR+ DGA+ V   + GV  Q+ETV RQA   ++  +  VNKMDR
Sbjct:   81 EHRINIIDTPGHVDFTIEVERSLRVLDGAMAVFCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDR 146          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG1_PSEHT (Elongation factor G 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 3
Query:   36 INLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            IN+ID+PGHVDF+ EV  +LR+ DGA+VV+    GV  QTETV RQA    +  ++ VNKMDR
Sbjct:   84 INIIDTPGHVDFTIEVERSLRVLDGAVVVLCASSGVQPQTETVWRQANKYEVPRMIFVNKMDR 146          
BLAST of EY692614 vs. ExPASy Swiss-Prot
Match: EFG1_PELCD (Elongation factor G 1 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 3
Query:   36 INLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR 224
            INLID+PGH+DF+ EV  +LR+ D A+V+   +EGV  QTE+V RQA    +  +  +NKMDR
Sbjct:   76 INLIDTPGHIDFTIEVERSLRVLDSAVVIFSAVEGVQAQTESVWRQADRYAVPRICLINKMDR 138          
The following BLAST results are available for this feature:
BLAST of EY692614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
EFG_BACAN9.898e-1152.38Elongation factor G OS=Bacillus anthracis GN=fusA ... [more]
EFG_BACAC9.898e-1152.38Elongation factor G OS=Bacillus anthracis (strain ... [more]
EFG_BACAA9.898e-1152.38Elongation factor G OS=Bacillus anthracis (strain ... [more]
EFG_ACIF59.898e-1151.52Elongation factor G OS=Acidithiobacillus ferrooxid... [more]
EFG_ACIF29.898e-1151.52Elongation factor G OS=Acidithiobacillus ferrooxid... [more]
EFG1_PSEHT9.898e-1155.56Elongation factor G 1 OS=Pseudoalteromonas halopla... [more]
EFG1_PELCD9.898e-1150.79Elongation factor G 1 OS=Pelobacter carbinolicus (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692614 ID=EY692614; Name=EY692614; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGGAACGTAATGGGAATGAGTACCTGATCAATCTTATTGAT
TCCCCTGGGCACGTTGACTTCTCATCTGAGGTGACAGCTGCTCTTCGTAT
AACTGATGGTGCCCTTGTTGTGGTGGATTGTATTGAGGGTGTCTGTGTGC
AAACGGAAACTGTGCTTAGACAAGCCTTGGGTGAGAGGATTAGGCCAGTC
TTGACTGTGAATAAGATGGATAGGTGCTTTCTTGAGCTCCAGGTTGATGG
AGAGGAGGCTTACCAGACTTTCTCCAGAGTGGTTGAGAATGCTAATGTCA
TTATGGCTACCTATGAAGATCCACTCCTGGGGGATGTTCAAGTATACCCT
GAGAAAGGAACCGTTGCTTTCTCAGCTGGTTTGCATGGCTGGGCTTTTAC
TTTGACCAACTTTGCTAAGATGTATGCATCAAAATTTGGAGTCGATGAGT
CTAAGATGATGGAGAGGCTCTGGGGTGAGAATTTCTTTGACCCGGCCACA
AAGAAGTGGACAACCAAGAACACTGGTAGTGCGACATGCAAGCGTGGTTT
TGTTCAGTTTTGCTATGAACCGATTAAGCAGATTATCAACACTTGCATGA
ATGATCAGAAAGATAAGCTGTGGCCCATGTTGCAAAAGCTTGGTGTCACG
ATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGCGTGT
CATGCAGACCTGGCTTCCCTGCAGTAGTGCACTTTTGGAAATGATGATCT
TTNCACTTCCCTCTCNNNTCACGNNCAAAATATCGTGTTGAGAACTTGTA
TGAGGNNCCTCTTGATGATCATATGCTAATGCTATTCCGACTGTGATCCT
AATGGCCTCTATGCTCTATGATCTAGATGATCCTGCATCTGATAAGGTAG
TCTTTGCTTC
back to top