EY692572

Overview
NameEY692572
Unique NameEY692572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_CHAGB (Mitochondrial intermediate peptidase OS=Chaetomium globosum GN=OCT1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14
Identity = 81/274 (29.56%), Postives = 119/274 (43.43%), Query Frame = 1
Query:    4 RVRGRVGFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAW-------------MDEVVSRSR-------------------VLSRNGTT-SRLPVAHMVCNQTPPV--GDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLP-EDVYLKLLAARTFRAGSFSLRQLRFASVDLELHTNYV--PG-GSESVFDVDQRVSKRNPVXPP 708
            RV GR G +L  + F + + P  G    W+ DVR   V   +    A  Y D ++RP++    A              M+EV  +++                     SR+G +  +LP   +VC+   P   GD+P+L++F ++ET+FHE GHA+  +L +     VAG R    D  ELPS  ME +      L   A+H++T E LP   V  K    R F A   +  Q+  A  D  LH+     PG    ++F   QR     P  PP
Sbjct:  412 RVAGRQG-DLLSSYFSLGV-PLVG--ETWHPDVRRLDVVSDTDGHVAVLYCDLFTRPNKSPNPAHFTLRCSREIFASEMEEVWEQTQQSNQKSMFGSPELAATDGMTFSRHGDSIKQLPTIALVCDFPQPSKHGDQPALLSFLQLETLFHEMGHAIHSVLARTSFQTVAGTR-CATDLAELPSTLMEFFAADAAVLGQFARHHETNEPLPYRMVAQKARQTRRFEALD-TENQIVTAMFDQALHSPRAGEPGFDPTAIFHALQRTHSCAPPDPP 679          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_COCIM (Mitochondrial intermediate peptidase OS=Coccidioides immitis GN=OCT1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 68/227 (29.96%), Postives = 100/227 (44.05%), Query Frame = 1
Query:   43 LFGIDIEPADGL-APVWNNDVRFYCVKDSSGSPNAYFYFDPYSRP-------------SEKKGGAWMDEVVSRSRVLSRN---GTTSR--------LPVAHMVCN-QTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFR----AGSFSLRQLRFASVDLELHTN 633
            L+GI + P + L   +WN DVR   V D S    A  Y D ++RP             S +   A + E    S  L  N    TT +        LP   ++C+         PSL+    +ET+FHE GHA+  +L + D   ++G R    D VELPS  MEN+    + L   A+H++T E LPE +   +   R  R     G  +  Q+  A +D   H++
Sbjct:  434 LYGIRLVPTETLPGEIWNPDVRRLDVVDESDRRLAVIYCDLFTRPYKSPNPTHFTLRGSREISQAEIAECADLSSSLHPNDGMATTIKPETNKLYQLPTVALICDFDQSESRSTPSLLNEHNLETLFHEMGHAVHSVLARTDLQTISGTR-CATDFVELPSVIMENFATAPEVLALYARHWETNEPLPEHMVKSMELNRQSRVSMHGGMDNEVQILMALLDQAYHSS 659          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_PICST (Mitochondrial intermediate peptidase OS=Pichia stipitis GN=OCT1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 66/229 (28.82%), Postives = 101/229 (44.10%), Query Frame = 1
Query:   31 LAKTLFGIDIEPADGL-APVWN-NDVRFYCVKDSSGSPNAYFYFDPYSRP-----------SEKKGGAWMDEVVSRSRVLSR--NGTTSRLPVAHMVCN----QTPPVG-------DKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELHTNYV 639
            L K+++ ++  P   L    W+ N VR   V D S      F +  +  P           S K       E   + R L +     TS+LPV  ++CN        +G       +KP+L++  +V+TVFHE GHA+  M+ + D   ++G R    D VELPS  ME++      L  IAKHY+TGE L   +  +    +       +  Q + A +D  LH+  V
Sbjct:  464 LFKSIYNVEFVPVATLKGETWDQNQVRKVAVVDDSTKKKLGFLYLDFWSPKVLPSHFTIVCSRKLNLDIKSETKDKMRQLVQLDEDETSQLPVISLICNFQKSNDGHIGRFAGVENEKPTLLSLNQVDTVFHEMGHAMHSMIGRTDLHNLSGTR-CATDFVELPSVLMESFSKDPRVLCKIAKHYETGEPLSPKLLAQHQTQKVMLDECETYMQSKMAMLDQVLHSEDV 691          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: MIPEP_HUMAN (Mitochondrial intermediate peptidase OS=Homo sapiens GN=MIPEP PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13
Identity = 60/202 (29.70%), Postives = 91/202 (45.05%), Query Frame = 1
Query:   31 LAKTLFGIDI---EPADGLAPVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWMDEVVSRSRVLSRNGTTSRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELH 627
            L   L GI +   +PA G   VW+ DVR   V   S     Y Y D + R  +            R   L  +G   +LPV  ++ N        P+L+T   +E +FHE GHA+  ML +     V G R    D  E+PS  ME +      +   A+HYQTG+ LP+++  +L  ++   A +    Q+ +A++D   H
Sbjct:  393 LLNRLLGISLYAEQPAKG--EVWSEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDC---HFTIRGGRLKEDGDY-QLPVVVLMLNLPRSSRSSPTLLTPSMMENLFHEMGHAMHSMLGRTRYQHVTGTR-CPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQVFYATLDQIYH 587          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: MIPEP_PONAB (Mitochondrial intermediate peptidase OS=Pongo abelii GN=MIPEP PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.454e-13
Identity = 60/202 (29.70%), Postives = 91/202 (45.05%), Query Frame = 1
Query:   31 LAKTLFGIDI---EPADGLAPVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWMDEVVSRSRVLSRNGTTSRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELH 627
            L   L GI +   +PA G   VW+ DVR   V   S     Y Y D + R  +            R   L  +G   +LPV  ++ N        P+L+T   +E +FHE GHA+  ML +     V G R    D  E+PS  ME +      +   A+HYQTG+ LP+++  +L  ++   A +    Q+ +A++D   H
Sbjct:  393 LLNRLLGISLYAEQPAKG--EVWSEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDC---HFTIRGGRLKEDGDY-QLPVVVLMLNLPRSSRSSPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTR-CPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQVFYATLDQIYH 587          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_PICGU (Mitochondrial intermediate peptidase OS=Pichia guilliermondii GN=OCT1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  253 RLPVAHMVCN---QTPPVG-------DKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELH 627
            +LPV  +VCN       +G        KP+L+T  +V+T+FHE GHA+  M+ +     ++G R    D VELPS  ME++      L  IA+HY T E LP D+  K    R     S +  Q + A +D  LH
Sbjct:  526 QLPVISLVCNFHQGNSFIGRFAGLETSKPTLLTLDQVDTIFHEMGHAMHSMIGRTKLQNLSGTR-CSTDFVELPSVLMESFSKDPRVLGRIARHYSTNELLPHDILAKHQHYRNVLENSETYMQSKMAMLDQVLH 659          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: MIPEP_MOUSE (Mitochondrial intermediate peptidase OS=Mus musculus GN=Mipep PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 54/181 (29.83%), Postives = 84/181 (46.41%), Query Frame = 1
Query:   85 VWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWMDEVVSRSRVLSRNGTTSRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELH 627
            VW ND+R   V   S     Y Y D + R ++ +          R   L  +G+  +LPV  ++ N      D P+L+T   +E +FHE GHA+  ML +     V G R    D  E+PS  ME +      +   AKHYQTG+ LP+ +  +L  ++     +    Q+ +A++D   H
Sbjct:  410 VWCNDIRKLAVVHESEGLLGYIYCDFFQRANKPQQDC---HFTIRGGRLKEDGSY-QLPVVVLMLNLPHASRDFPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTR-CPTDFAEVPSILMEYFSNDYRVVSQFAKHYQTGQPLPKAMVSRLCESKKVCTAAEMQLQVFYAALDQIYH 585          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_ASPTN (Mitochondrial intermediate peptidase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=oct1 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 72/262 (27.48%), Postives = 108/262 (41.22%), Query Frame = 1
Query:   31 LAKTLFGIDIEPADGLAP--VWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWMDEVVSR------------------------SRVLSRNGTTSRLPVAHMVCN-QTPPV--GDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSL----RQLRFASVDLELHTNYVPGGSESVFDVDQRVSKRNPVXPPLPE 717
            L   L+G+ + P +  AP   WN DVR   V D +    A  Y D +SRP++    A      SR                        + V  ++ T  +LP   +VC+   PP     +PSL++   V T+FHE GHAL  +L +     ++G R    D  ELPS  ME +    + L   A+H+QT + L E++   +   RT     +       Q+  A VD   H+  VP  +    D      + +     LPE
Sbjct:  432 LFNRLYGVRLVPQE-TAPGETWNPDVRRLDVVDEAERHIAVIYCDLFSRPNKHPNPAHFTLRCSREISNQEVAECASMDQSAHPNDGMATAVDPQSKTLRQLPTIALVCDFPDPPATSAGRPSLLSEHSVRTLFHEMGHALHSILGQTRLQSISGTR-CATDFAELPSVLMERFATAPEVLSMYARHWQTDQPLSENMMRSMEQDRTAHGSIYGAVENEAQILMALVDQAYHS--VPAEAAGKIDSTAIYHQVSQAHSSLPE 689          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: PMIP_LODEL (Mitochondrial intermediate peptidase OS=Lodderomyces elongisporus GN=OCT1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 56/194 (28.87%), Postives = 90/194 (46.39%), Query Frame = 1
Query:   85 VWNNDV--RFYCVKDSSGSPNAYFYFD---PYSRPSEKKGGAWMD----EVVSRSRVLSRNGTTSRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELHTNYV 639
            VWN     +   + +S+G    Y Y D   P   PS             E VS    + +     +LPV  +VCN T      P+L++  +V+T+FHE GHA+  M+ +     ++G R    D VE+PS  ME++      L  I  HY+TGE +P ++  +  + R+      +  Q + A +D ELH+  +
Sbjct:  500 VWNEKRVRKLNVLNNSNGETMGYLYLDFCSPKVFPSHFTVVCLRQLNKAESVSEHGDMVQLSKDYQLPVVALVCNFT---SGNPTLLSLDQVDTIFHEMGHAMHSMIGRTQLHNLSGTR-CATDFVEIPSVLMESFSKDPRVLSEIGCHYRTGEPVPINLLEQAQSQRSALEACETFVQSKMAMLDQELHSKEI 689          
BLAST of EY692572 vs. ExPASy Swiss-Prot
Match: MIPEP_RAT (Mitochondrial intermediate peptidase OS=Rattus norvegicus GN=Mipep PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 55/181 (30.39%), Postives = 84/181 (46.41%), Query Frame = 1
Query:   85 VWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWMDEVVSRSRVLSRNGTTSRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDESLVAGIRGIEWDAVELPSQFMENWCYHRDTLMSIAKHYQTGESLPEDVYLKLLAARTFRAGSFSLRQLRFASVDLELH 627
            VW  DVR   V   S     Y Y D + R ++ +          R   L  +G+  +LPV  ++ N      D P+L+T   +E +FHE GHA+  ML +     V G R    D  E+PS  ME +      +   AKHYQTG+ LP+ +  +L  ++   A +    Q+ +A++D   H
Sbjct:  409 VWCIDVRKLAVVHESEGLLGYIYCDFFQRANKPQQDC---HFTIRGGRLKEDGSY-QLPVVVLMLNLPHASRDFPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTR-CPTDFAEVPSILMEYFSNDYRVVSQFAKHYQTGQPLPKAMVSRLCESKKVCAAAEMQLQVFYAALDQIYH 584          
The following BLAST results are available for this feature:
BLAST of EY692572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PMIP_CHAGB3.952e-1429.56Mitochondrial intermediate peptidase OS=Chaetomium... [more]
PMIP_COCIM5.162e-1429.96Mitochondrial intermediate peptidase OS=Coccidioid... [more]
PMIP_PICST1.962e-1328.82Mitochondrial intermediate peptidase OS=Pichia sti... [more]
MIPEP_HUMAN5.707e-1329.70Mitochondrial intermediate peptidase OS=Homo sapie... [more]
MIPEP_PONAB7.454e-1329.70Mitochondrial intermediate peptidase OS=Pongo abel... [more]
PMIP_PICGU1.661e-1235.56Mitochondrial intermediate peptidase OS=Pichia gui... [more]
MIPEP_MOUSE1.661e-1229.83Mitochondrial intermediate peptidase OS=Mus muscul... [more]
PMIP_ASPTN2.169e-1227.48Mitochondrial intermediate peptidase OS=Aspergillu... [more]
PMIP_LODEL2.833e-1228.87Mitochondrial intermediate peptidase OS=Lodderomyc... [more]
MIPEP_RAT4.832e-1230.39Mitochondrial intermediate peptidase OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-B01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692572 ID=EY692572; Name=EY692572; organism=Citrus sinensis; type=EST; length=734bp
CCACGCGTCCGCGGACGCGTGGGTTTCAATCTTGCGAAGACACTTTTTGG
AATCGATATCGAACCGGCTGATGGTCTAGCTCCTGTTTGGAACAATGATG
TCAGATTCTATTGTGTCAAAGATTCTTCAGGTAGTCCAAATGCATACTTC
TATTTTGATCCATATTCCCGTCCATCTGAAAAAAAGGGAGGTGCGTGGAT
GGATGAGGTTGTTTCTCGAAGTCGTGTTCTGTCACGCAACGGTACTACGT
CGAGGTTACCTGTTGCCCACATGGTGTGCAATCAAACCCCACCTGTTGGG
GATAAGCCAAGCCTTATGACATTTCGTGAGGTTGAGACTGTTTTCCATGA
ATTTGGTCATGCACTTCAGCATATGTTGACCAAACAGGATGAAAGCCTAG
TTGCTGGCATCCGGGGAATAGAGTGGGATGCTGTTGAATTACCCTCACAA
TTCATGGAAAACTGGTGTTACCATAGGGATACTTTGATGAGCATTGCCAA
GCACTATCAAACTGGAGAGAGTCTCCCTGAAGATGTATACTTGAAGCTGC
TTGCTGCGAGGACTTTCCGTGCTGGCTCCTTTAGTCTACGTCAGCTAAGA
TTTGCTAGTGTAGACTTGGAGCTGCATACAAATTATGTTCCTGGCGGNTC
AGAGTCTGTTTTTGATGTCGATCAAAGGGTTTCGAAAAGAAACCCAGTGN
TACCCCCACTGCCAGAGGACAGATTCCTTTGCAG
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